home > sra-sample > ERS1247339
identifier ERS1247339
type sra-sample
sameAs
biosample　 SAMEA4076229
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076229
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:26Z
INSDC last update　 2016-07-13T01:15:02Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E2H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E2H04
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Cortijo Conejo
assigned_from_geo　 true
backup　 false
bird_family　 Corvidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 7
code_id_statistica　 553
coll_date_juliane_days　 114
collection date　 4/25/07 0:00
collection_timestamp　 4/25/07
comments_in_spanish　 6pollos
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/1/07
depth　 0
dna_extracted　 true
elevation　 1055
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 5.771622195
enterococcus_density　 0.295980625
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 UCON 11.1
estefania_plates　 2H04
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 5/24/07
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/4/07
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Black-billed Magpie
host scientific name　 Passeriformes
host subject id　 Urraca.UCON11.1
host taxid　 34924
latitude　 37.40583611
lay_date_juliane_days　 107
laying_date　 7/17/07
log_enterobacteriaceae_density　 0.83069272
log_enterococcus_density　 0.112598509
log_mesophiles_density　 7.846926904
log_rel_growth_enterobact　 5.637266159
log_rel_growth_enterococcus　 0.200761493
log_rel_growth_mesophiles　 -1.00735704
log_rel_growth_staphylococcus　 0.524309523
log_staphylococcus_density　 0.031002323
longitude　 -3.082122222
mesophiles_density　 7.029539853E7
nest_type　 open
number_fledging　 4
number_sampled_eggs　 7
observer　 Juanma
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
predated　 No
public　 true
rel_growth_enterobacteriaceae　 433775.6389
rel_growth_enterococcus　 0.587674584
rel_growth_staphylococcus　 2.344333066
relative_growth_mesophiles　 -0.901679753
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E2H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Urraca.UCON11.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 124
species name　 Pica pica
staphylococcus_density　 0.073995156
storing_days　 6
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529903
sra-submission　 ERA674159
biosample　 SAMEA4076229
sra-study　 ERP016455
sra-experiment　 ERX1600795
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:48:53Z
dateModified 2021-09-24T10:04:32Z
datePublished 2016-07-14T16:22:14Z