home > sra-sample > ERS1247429
identifier ERS1247429
type sra-sample
sameAs
biosample　 SAMEA4076319
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076319
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:26Z
INSDC last update　 2016-07-13T01:15:05Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E3F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E3F05
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Dolar
assigned_from_geo　 true
backup　 true
bird_family　 Laniidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 6
code_id_statistica　 65
coll_date_juliane_days　 129
collection date　 5/10/07 0:00
collection_timestamp　 5/10/07
comments_in_spanish　 Depredado
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/11/07
depth　 0
dna_extracted　 true
elevation　 1154
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 2979649.698
enterococcus_density　 1.023648013
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 Alcaudon 5.2
estefania_plates　 3F05
extracted DNA avail now　 true
feathers　 true
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Southern grey shrike
host scientific name　 Passeriformes
host subject id　 Alcaudon.Alcaudon5.2
host taxid　 219215
latitude　 37.19090278
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 6.474165355
log_enterococcus_density　 0.306134975
log_mesophiles_density　 6.876221842
log_rel_growth_enterobact　 -0.169142352
log_rel_growth_enterococcus　 0.306134975
log_rel_growth_mesophiles　 -0.21524336
log_rel_growth_staphylococcus　 0
log_staphylococcus_density　 0
longitude　 -2.992936111
mesophiles_density　 7520068.285
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 6
observer　 Juan
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P9D08
predated　 egg phase
public　 true
rel_growth_enterobacteriaceae　 -0.322580572
rel_growth_enterococcus　 1.023648013
rel_growth_staphylococcus　 0
relative_growth_mesophiles　 -0.390804566
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E3F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Alcaudon.Alcaudon5.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 261
species name　 Lanius meridionalis
staphylococcus_density　 0
storing_days　 1
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1529993
sra-submission　 ERA674159
biosample　 SAMEA4076319
sra-study　 ERP016455
sra-experiment　 ERX1600885
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:11Z
dateModified 2021-09-24T10:04:57Z
datePublished 2016-07-14T16:23:14Z