home > sra-sample > ERS1247438
identifier ERS1247438
type sra-sample
sameAs
biosample　 SAMEA4076328
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076328
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:05Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E3G01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E3G01
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.047197551
area　 Calahorra
assigned_from_geo　 true
backup　 false
bird_family　 Sturnidae
bird_order　 Passeriformes
broken_eggs　 0
brood_size　 3
clutch_size　 4
code_id_statistica　 271
coll_date_juliane_days　 123
collection date　 5/4/07 0:00
collection_timestamp　 5/4/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/5/07
depth　 0
dna_extracted　 true
elevation　 1106
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 4478819.788
enterococcus_density　 1.887694012
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 StE 19 (4/5)
estefania_plates　 3G01
extracted DNA avail now　 true
feathers　 true
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/6/07
hatching_success　 0.75
hatching_synchrony　 syn
host common name　 Sptoless starling
host scientific name　 Passeriformes
host subject id　 Estornino.E19.2
host taxid　 381112
latitude　 37.25371111
lay_date_juliane_days　 108
laying_date　 7/18/07
log_enterobacteriaceae_density　 6.651163685
log_enterococcus_density　 0.460551172
log_mesophiles_density　 9.560083119
log_rel_growth_enterobact　 0.422073529
log_rel_growth_enterococcus　 -3.211334876
log_rel_growth_mesophiles　 2.625862856
log_rel_growth_staphylococcus　 0.514221978
log_staphylococcus_density　 0.563846645
longitude　 -3.029825
mesophiles_density　 3631475503
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 4
observer　 Carlos
physical_location_1　 U Granada
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P2G08
public　 true
rel_growth_enterobacteriaceae　 1.642856173
rel_growth_enterococcus　 -0.999385297
rel_growth_staphylococcus　 2.267548017
relative_growth_mesophiles　 421.5351622
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E3G01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Estornino.E19.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 211
species name　 Sturnus unicolor
staphylococcus_density　 2.663082036
storing_days　 1
unhatched_eggs　 1
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530002
sra-submission　 ERA674159
biosample　 SAMEA4076328
sra-study　 ERP016455
sra-experiment　 ERX1600894
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:13Z
dateModified 2021-09-24T10:04:59Z
datePublished 2016-07-14T16:23:14Z