home > sra-sample > ERS1247453
identifier ERS1247453
type sra-sample
sameAs
biosample　 SAMEA4076343
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076343
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:06Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E3H01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E3H01
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Fuentealamo
assigned_from_geo　 true
backup　 false
bird_family　 Muscicapidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 4
code_id_statistica　 183
coll_date_juliane_days　 124
collection date　 5/5/07 0:00
collection_timestamp　 5/5/07
comments_in_spanish　 Depredado
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/6/07
depth　 0
dna_extracted　 true
elevation　 1145
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 9978549.904
enterococcus_density　 2.363340767
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 COL 1.1
estefania_plates　 3H01
extracted DNA avail now　 true
feathers　 true
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Black weathear
host scientific name　 Passeriformes
host subject id　 Collalbanegra.Col1.1
host taxid　 391703
latitude　 37.34600556
lay_date_juliane_days　 119
laying_date　 7/29/07
log_enterobacteriaceae_density　 6.999067477
log_enterococcus_density　 0.526770871
log_mesophiles_density　 9.896405092
log_rel_growth_enterobact　 0.265314424
log_rel_growth_enterococcus　 -0.120730055
log_rel_growth_mesophiles　 -3.999999449
log_rel_growth_staphylococcus　 -0.183323048
log_staphylococcus_density　 0.183323048
longitude　 -3.061197222
mesophiles_density　 7877802556
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 4
observer　 Juanma
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P2G09
predated　 egg phase
public　 true
rel_growth_enterobacteriaceae　 0.842105179
rel_growth_enterococcus　 -0.242696533
rel_growth_staphylococcus　 -0.344342624
relative_growth_mesophiles　 -0.9999
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E3H01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Collalbanegra.Col1.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 212
species name　 Oenanthe leucura
staphylococcus_density　 0.525186837
storing_days　 1
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530017
sra-submission　 ERA674159
biosample　 SAMEA4076343
sra-study　 ERP016455
sra-experiment　 ERX1600909
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:16Z
dateModified 2021-09-24T10:05:03Z
datePublished 2016-07-14T16:23:14Z