home > sra-sample > ERS1247454
identifier ERS1247454
type sra-sample
sameAs
biosample　 SAMEA4076344
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076344
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:06Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E3H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E3H02
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Charches
assigned_from_geo　 true
backup　 false
bird_family　 Corvidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 6
code_id_statistica　 473
coll_date_juliane_days　 124
collection date　 5/5/07 0:00
collection_timestamp　 5/5/07
comments_in_spanish　 Sin datos de los pollos
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/20/07
depth　 0
dna_extracted　 true
elevation　 1310
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 7067309.663
enterococcus_density　 3.467949406
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CC17C.2
estefania_plates　 3H02
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/11/07
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Black-billed Magpie
host scientific name　 Passeriformes
host subject id　 Urraca.cc17c.2
host taxid　 34924
latitude　 37.28454722
lay_date_juliane_days　 104
laying_date　 7/14/07
log_enterobacteriaceae_density　 6.849254182
log_enterococcus_density　 0.650108247
log_mesophiles_density　 6.978053324
log_rel_growth_enterobact　 6.849254182
log_rel_growth_enterococcus　 -1.317505137
log_rel_growth_mesophiles　 5.321098861
log_rel_growth_staphylococcus　 -0.051717908
log_staphylococcus_density　 0
longitude　 -2.985819444
mesophiles_density　 9507214.19
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 6
observer　 Juan
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P2H06
public　 true
rel_growth_enterobacteriaceae　 7067309.663
rel_growth_enterococcus　 -0.951861244
rel_growth_staphylococcus　 -0.112267557
relative_growth_mesophiles　 209457.9203
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E3H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Urraca.cc17c.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 237
species name　 Pica pica
staphylococcus_density　 0
storing_days　 15
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530018
sra-submission　 ERA674159
biosample　 SAMEA4076344
sra-study　 ERP016455
sra-experiment　 ERX1600910
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:16Z
dateModified 2021-09-24T10:05:03Z
datePublished 2016-07-14T16:23:14Z