ENA first public |
2016-07-13 |
ENA last update |
2016-07-13 |
External Id |
SAMEA4076354 |
INSDC center alias |
UCSDMI |
INSDC center name |
University of California San Diego Microbiome Initiative |
INSDC first public |
2016-07-13T17:01:27Z |
INSDC last update |
2016-07-13T01:15:06Z |
INSDC status |
public |
Submitter Id |
qiita_sid_1632:1632.E3H10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences |
abandoned |
No |
altitude |
0 |
anonymized name |
E3H10 |
arcsine_fledge_success_brood |
Missing: Not collected |
arcsine_fledge_success_clutch |
Missing: Not collected |
arcsine_hatching_success |
Missing: Not collected |
area |
Cortijo Conejo |
assigned_from_geo |
true |
backup |
false |
bird_family |
Corvidae |
bird_order |
Passeriformes |
broken_eggs |
Missing: Not collected |
brood_size |
Missing: Not collected |
clutch_size |
7 |
code_id_statistica |
552 |
coll_date_juliane_days |
125 |
collection date |
5/6/07 0:00 |
collection_timestamp |
5/6/07 |
comments_in_spanish |
Depredado; 1pollo+3huevos |
common name |
organismal metagenome |
country |
GAZ:Spain |
country_nation |
Spain |
country_region |
Hoya de Guadix |
culturing_date |
5/12/07 |
depth |
0 |
dna_extracted |
true |
elevation |
1055 |
empo_0 |
EMP sample |
empo_1 |
Host-associated |
empo_2 |
Animal |
empo_3 |
Animal surface |
enterobacteriaceae_density |
2500202.48 |
enterococcus_density |
1.914425907 |
env biome |
mediterranean shrubland biome |
env feature |
nest of bird |
env matter |
egg |
env package |
host-associated |
eppendorf_name |
UCON 10.2 |
estefania_plates |
3H10 |
extracted DNA avail now |
true |
feathers |
false |
fledge_success_brood |
Missing: Not collected |
fledge_success_clutch |
Missing: Not collected |
fledging_date |
Missing: Not collected |
geo loc name |
Spain:Hoya de Guadix |
hatching_date |
5/7/07 |
hatching_success |
Missing: Not collected |
hatching_synchrony |
asyn |
host common name |
Black-billed Magpie |
host scientific name |
Passeriformes |
host subject id |
Urraca.UCON10.2 |
host taxid |
34924 |
latitude |
37.40583611 |
lay_date_juliane_days |
101 |
laying_date |
7/11/07 |
log_enterobacteriaceae_density |
6.397975355 |
log_enterococcus_density |
0.464553019 |
log_mesophiles_density |
7.426003922 |
log_rel_growth_enterobact |
5.48634995 |
log_rel_growth_enterococcus |
-0.167620368 |
log_rel_growth_mesophiles |
-2.613700486 |
log_rel_growth_staphylococcus |
0 |
log_staphylococcus_density |
0 |
longitude |
-3.082122222 |
mesophiles_density |
2.666882645E7 |
nest_type |
open |
number_fledging |
Missing: Not provided |
number_sampled_eggs |
7 |
observer |
Juanma |
physical_specimen_location |
CCME |
physical_specimen_remaining |
true |
plants |
true |
platero_plates |
P3C011 |
predated |
brood phase |
public |
true |
rel_growth_enterobacteriaceae |
306442.1728 |
rel_growth_enterococcus |
-0.320202392 |
rel_growth_staphylococcus |
0 |
relative_growth_mesophiles |
-0.997566118 |
required_sample_info_status |
completed |
sample name |
qiita_sid_1632:1632.E3H10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences |
sample type |
bird egg shell |
sample_nest |
Urraca.UCON10.2 |
sample_progress |
sequenced (16S) |
sampling time |
2 |
sampling_code_id |
305 |
species name |
Pica pica |
staphylococcus_density |
0 |
storing_days |
6 |
unhatched_eggs |
Missing: Not provided |
year |
2007 |