home > sra-sample > ERS1247477
identifier ERS1247477
type sra-sample
sameAs
biosample　 SAMEA4076367
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076367
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:26Z
INSDC last update　 2016-07-13T01:15:06Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E4A09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E4A09
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Granada
assigned_from_geo　 true
backup　 true
bird_family　 Turdidae
bird_order　 Passeriformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 3
code_id_statistica　 399
coll_date_juliane_days　 Missing: Not collected
collection date　 8/28/12 0:00
collection_timestamp　 8/28/12
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/25/07
depth　 0
dna_extracted　 true
elevation　 698
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 0.826498015
enterococcus_density　 0.206624504
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 G 12.1
estefania_plates　 4A09
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Blackbird
host scientific name　 Passeriformes
host subject id　 Mirlo.G12.1
host taxid　 9187
latitude　 37.17907778
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 0.261619204
log_enterococcus_density　 0.081572141
log_mesophiles_density　 7.497025425
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 1.347960483
longitude　 -3.611505556
mesophiles_density　 3.140692456E7
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 3
observer　 Juandiego
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P4B010
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E4A09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Mirlo.G12.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 404
species name　 Turdus merula
staphylococcus_density　 21.28232388
storing_days　 Missing: Not provided
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530041
sra-submission　 ERA674159
biosample　 SAMEA4076367
sra-study　 ERP016455
sra-experiment　 ERX1600933
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:21Z
dateModified 2021-09-24T10:05:09Z
datePublished 2016-07-14T16:23:14Z