home > sra-sample > ERS1247486
identifier ERS1247486
type sra-sample
sameAs
biosample　 SAMEA4076376
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076376
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:07Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E4B04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E4B04
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.570796327
area　 Granada
assigned_from_geo　 true
backup　 false
bird_family　 Turdidae
bird_order　 Passeriformes
broken_eggs　 0
brood_size　 3
clutch_size　 3
code_id_statistica　 379
coll_date_juliane_days　 Missing: Not collected
collection date　 4/23/07 0:00
collection_timestamp　 4/23/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/29/07
depth　 0
dna_extracted　 true
elevation　 688
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 4366.278828
enterococcus_density　 1
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 56.2
estefania_plates　 4B04
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 4/27/07
hatching_success　 1
hatching_synchrony　 asyn
host common name　 Blackbird
host scientific name　 Passeriformes
host subject id　 Mirlo.56.2
host taxid　 9187
latitude　 37.17907778
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 3.64021092
log_enterococcus_density　 0.301029996
log_mesophiles_density　 4.661310238
log_rel_growth_enterobact　 -3.311654455
log_rel_growth_enterococcus　 0.301029996
log_rel_growth_mesophiles　 -1.522869557
log_rel_growth_staphylococcus　 0
log_staphylococcus_density　 0
longitude　 -3.611505556
mesophiles_density　 45845.92769
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 3
observer　 Juandiego
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P3G06
public　 true
rel_growth_enterobacteriaceae　 -0.999512083
rel_growth_enterococcus　 1
rel_growth_staphylococcus　 0
relative_growth_mesophiles　 -0.969999365
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E4B04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Mirlo.56.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 467
species name　 Turdus merula
staphylococcus_density　 0
storing_days　 36
unhatched_eggs　 0
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530050
sra-submission　 ERA674159
biosample　 SAMEA4076376
sra-study　 ERP016455
sra-experiment　 ERX1600942
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:23Z
dateModified 2021-09-24T10:05:11Z
datePublished 2016-07-14T16:23:14Z