home > sra-sample > ERS1247535
identifier ERS1247535
type sra-sample
sameAs
biosample　 SAMEA4076425
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076425
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:08Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E4F01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E4F01
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Charches
assigned_from_geo　 true
backup　 false
bird_family　 Cuculidae
bird_order　 Cuculiformes
broken_eggs　 0
brood_size　 1
clutch_size　 1
code_id_statistica　 214
coll_date_juliane_days　 129
collection date　 5/10/07 0:00
collection_timestamp　 5/10/07
comments_in_spanish　 Sin datos de los pollos
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/14/07
depth　 0
dna_extracted　 true
elevation　 1310
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 1821495.445
enterococcus_density　 17.92385615
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CC12B.2
estefania_plates　 4F01
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 5/14/07
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Great-spotted cuckoo
host scientific name　 Cuculiformes
host subject id　 Crialo.cc12b.2
host taxid　 78203
latitude　 37.28454722
lay_date_juliane_days　 114
laying_date　 7/24/07
log_enterobacteriaceae_density　 6.260428328
log_enterococcus_density　 1.277009638
log_mesophiles_density　 6.460788074
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 0
longitude　 -2.985819444
mesophiles_density　 2889268.637
nest_type　 open
number_fledging　 Missing: Not provided
number_sampled_eggs　 1
observer　 Juan
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 true
platero_plates　 P3E10
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E4F01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Crialo.cc12b.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 329
species name　 Clamator glandarius
staphylococcus_density　 0
storing_days　 4
unhatched_eggs　 0
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530099
sra-submission　 ERA674159
biosample　 SAMEA4076425
sra-study　 ERP016455
sra-experiment　 ERX1600991
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:33Z
dateModified 2021-09-24T10:02:04Z
datePublished 2016-07-14T16:23:15Z