home > sra-sample > ERS1247568
identifier ERS1247568
type sra-sample
sameAs
biosample　 SAMEA4076458
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076458
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:26Z
INSDC last update　 2016-07-13T01:15:09Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E4H09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E4H09
arcsine_fledge_success_brood　 0.100167421
arcsine_fledge_success_clutch　 0.100167421
arcsine_hatching_success　 Missing: Not collected
area　 Cortijo Bernabeles
assigned_from_geo　 true
backup　 true
bird_family　 Falconidae
bird_order　 Falconiformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 5
code_id_statistica　 153
coll_date_juliane_days　 139
collection date　 5/20/07 0:00
collection_timestamp　 5/20/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/24/07
depth　 0
dna_extracted　 true
elevation　 1162
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 18838.60563
enterococcus_density　 10.86842632
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CER.2.1
estefania_plates　 4H09
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 1
fledge_success_clutch　 1
fledging_date　 7/6/07
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Common kestrel
host scientific name　 Falconiformes
host subject id　 Cernicalo.Cer2.1
host taxid　 100819
latitude　 37.31399167
lay_date_juliane_days　 133
laying_date　 8/12/07
log_enterobacteriaceae_density　 4.275071807
log_enterococcus_density　 1.074393138
log_mesophiles_density　 7.30098451
log_rel_growth_enterobact　 1.524447485
log_rel_growth_enterococcus　 -0.719783888
log_rel_growth_mesophiles　 -0.693351326
log_rel_growth_staphylococcus　 0.328722676
log_staphylococcus_density　 0.05877224
longitude　 -3.056652778
mesophiles_density　 1.999790444E7
nest_type　 hole
number_fledging　 4
number_sampled_eggs　 5
observer　 Juanma
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P4C05
predated　 No
public　 true
rel_growth_enterobacteriaceae　 32.45395626
rel_growth_enterococcus　 -0.809359086
rel_growth_staphylococcus　 1.131683264
relative_growth_mesophiles　 -0.797395693
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E4H09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Cernicalo.Cer2.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 393
species name　 Falco tinnunculus
staphylococcus_density　 0.144912351
storing_days　 4
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530132
sra-submission　 ERA674159
biosample　 SAMEA4076458
sra-study　 ERP016455
sra-experiment　 ERX1601024
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:40Z
dateModified 2021-09-24T10:02:15Z
datePublished 2016-07-14T16:23:15Z