home > sra-sample > ERS1247613
identifier ERS1247613
type sra-sample
sameAs
biosample　 SAMEA4076503
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076503
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:11Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E5D02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E5D02
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Alicun
assigned_from_geo　 true
backup　 true
bird_family　 Columbiadae
bird_order　 Columbiformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 2
code_id_statistica　 437
coll_date_juliane_days　 139
collection date　 5/20/07 0:00
collection_timestamp　 5/20/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 5/24/07
depth　 0
dna_extracted　 true
elevation　 1059
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 0
enterococcus_density　 0
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 PAL A4.1
estefania_plates　 5D02
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Rock pigeon
host scientific name　 Columbiformes
host subject id　 Palomabravia.PalAli.1
host taxid　 8932
latitude　 37.43155278
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 0
log_enterococcus_density　 0
log_mesophiles_density　 0.074065557
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 0
longitude　 -3.055088889
mesophiles_density　 0.185947754
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 2
observer　 Gavilan
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P4F07
predated　 egg phase
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E5D02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Palomabravia.PalAli.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 395
species name　 Columba livia
staphylococcus_density　 0
storing_days　 4
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530177
sra-submission　 ERA674159
biosample　 SAMEA4076503
sra-study　 ERP016455
sra-experiment　 ERX1601069
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:49:51Z
dateModified 2021-09-24T10:02:27Z
datePublished 2016-07-14T16:23:15Z