home > sra-sample > ERS1247671
identifier ERS1247671
type sra-sample
sameAs
biosample　 SAMEA4076561
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076561
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:13Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E5H08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E5H08
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.570796327
area　 Torre Guajar
assigned_from_geo　 true
backup　 true
bird_family　 Strigidae
bird_order　 Strigiformes
broken_eggs　 0
brood_size　 5
clutch_size　 5
code_id_statistica　 80
coll_date_juliane_days　 153
collection date　 6/3/07 0:00
collection_timestamp　 6/3/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 6/20/07
depth　 0
dna_extracted　 true
elevation　 1039
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 1662414.944
enterococcus_density　 778401.3504
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 832.1
estefania_plates　 5H08
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 6/24/07
hatching_success　 1
hatching_synchrony　 asyn
host common name　 Eurasian scops-owl
host scientific name　 Strigiformes
host subject id　 Autillo.832.1
host taxid　 126827
latitude　 37.38953889
lay_date_juliane_days　 144
laying_date　 8/23/07
log_enterobacteriaceae_density　 6.220739696
log_enterococcus_density　 5.891204139
log_mesophiles_density　 7.689260526
log_rel_growth_enterobact　 0.200914746
log_rel_growth_enterococcus　 -0.938692497
log_rel_growth_mesophiles　 -0.872895144
log_rel_growth_staphylococcus　 -0.077577998
log_staphylococcus_density　 0.077577998
longitude　 -3.098552778
mesophiles_density　 4.889455718E7
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 5
observer　 Juanma
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P5C01
public　 true
rel_growth_enterobacteriaceae　 0.58823494
rel_growth_enterococcus　 -0.88483845
rel_growth_staphylococcus　 -0.163584635
relative_growth_mesophiles　 -0.865999982
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E5H08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Autillo.832.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 536
species name　 Otus scops
staphylococcus_density　 0.195578229
storing_days　 17
unhatched_eggs　 0
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530235
sra-submission　 ERA674159
biosample　 SAMEA4076561
sra-study　 ERP016455
sra-experiment　 ERX1601127
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:50:02Z
dateModified 2021-09-24T10:02:41Z
datePublished 2016-07-14T16:24:12Z