home > sra-sample > ERS1247704
identifier ERS1247704
type sra-sample
sameAs
biosample　 SAMEA4076594
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076594
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:14Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E6C09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 No
altitude　 0
anonymized name　 E6C09
arcsine_fledge_success_brood　 0.081740653
arcsine_fledge_success_clutch　 0.053477735
arcsine_hatching_success　 Missing: Not collected
area　 Via
assigned_from_geo　 true
backup　 true
bird_family　 Upuidae
bird_order　 Upupiformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 7
code_id_statistica　 17
coll_date_juliane_days　 160
collection date　 6/10/07 0:00
collection_timestamp　 6/10/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 6/26/07
depth　 0
dna_extracted　 true
elevation　 947
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 1425646.576
enterococcus_density　 7871.757141
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 5.2
estefania_plates　 6C08
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 0.666666667
fledge_success_clutch　 0.285714286
fledging_date　 6/24/07
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Eurasian hoopoe
host scientific name　 Upupiformes
host subject id　 Abubilla.4.2
host taxid　 57439
latitude　 37.31146944
lay_date_juliane_days　 136
laying_date　 8/15/07
log_enterobacteriaceae_density　 6.15401218
log_enterococcus_density　 3.896126855
log_mesophiles_density　 6.807224457
log_rel_growth_enterobact　 -0.229535453
log_rel_growth_enterococcus　 -1.246096626
log_rel_growth_mesophiles　 -0.005139639
log_rel_growth_staphylococcus　 0.608964076
log_staphylococcus_density　 0.707462348
longitude　 -3.119497222
mesophiles_density　 6415409.594
nest_type　 hole
number_fledging　 2
number_sampled_eggs　 7
observer　 Manolo
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P6C06
predated　 No
public　 true
rel_growth_enterobacteriaceae　 -0.410526146
rel_growth_enterococcus　 -0.943258165
rel_growth_staphylococcus　 3.064097101
relative_growth_mesophiles　 -0.011764704
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E6C09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Abubilla.4.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 577
species name　 Upupa epops
staphylococcus_density　 4.098733907
storing_days　 16
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530268
sra-submission　 ERA674159
biosample　 SAMEA4076594
sra-study　 ERP016455
sra-experiment　 ERX1601160
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:50:10Z
dateModified 2021-09-24T10:02:49Z
datePublished 2016-07-14T16:24:12Z