home > sra-sample > ERS1247708
identifier ERS1247708
type sra-sample
sameAs
biosample　 SAMEA4076598
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076598
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:14Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E6D04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude　 0
anonymized name　 E6D04
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 1.047197551
area　 Torre Guajar
assigned_from_geo　 true
backup　 true
bird_family　 Strigidae
bird_order　 Strigiformes
broken_eggs　 0
brood_size　 3
clutch_size　 4
code_id_statistica　 96
coll_date_juliane_days　 161
collection date　 6/11/07 0:00
collection_timestamp　 6/11/07
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 6/26/07
depth　 0
dna_extracted　 true
elevation　 1039
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 2777337.415
enterococcus_density　 7470.354411
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 Teg.8
estefania_plates　 6D03
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 6/11/07
hatching_success　 0.75
hatching_synchrony　 asyn
host common name　 Eurasian scops-owl
host scientific name　 Strigiformes
host subject id　 Autillo.TG8.2
host taxid　 126827
latitude　 37.38953889
lay_date_juliane_days　 132
laying_date　 8/11/07
log_enterobacteriaceae_density　 6.443628801
log_enterococcus_density　 3.873399338
log_mesophiles_density　 7.03062493
log_rel_growth_enterobact　 -2.920028253
log_rel_growth_enterococcus　 -3.380094994
log_rel_growth_mesophiles　 0.031791831
log_rel_growth_staphylococcus　 0
log_staphylococcus_density　 0
longitude　 -3.098552778
mesophiles_density　 1.073062183E7
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 4
observer　 Juanma
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P5H04
public　 true
rel_growth_enterobacteriaceae　 -0.998797814
rel_growth_enterococcus　 -0.999583222
rel_growth_staphylococcus　 0
relative_growth_mesophiles　 0.075949359
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E6D04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Autillo.TG8.2
sample_progress　 sequenced (16S)
sampling time　 2
sampling_code_id　 585
species name　 Otus scops
staphylococcus_density　 0
storing_days　 15
unhatched_eggs　 1
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530272
sra-submission　 ERA674159
biosample　 SAMEA4076598
sra-study　 ERP016455
sra-experiment　 ERX1601164
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:50:11Z
dateModified 2021-09-24T10:02:50Z
datePublished 2016-07-14T16:24:12Z