home > sra-sample > ERS1247738
identifier ERS1247738
type sra-sample
sameAs
biosample　 SAMEA4076628
organism bird metagenome
attributes
ENA first public　 2016-07-13
ENA last update　 2016-07-13
External Id　 SAMEA4076628
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-13T17:01:27Z
INSDC last update　 2016-07-13T01:15:15Z
INSDC status　 public
Submitter Id　 qiita_sid_1632:1632.E6G05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned　 egg phase
altitude　 0
anonymized name　 E6G05
arcsine_fledge_success_brood　 Missing: Not collected
arcsine_fledge_success_clutch　 Missing: Not collected
arcsine_hatching_success　 Missing: Not collected
area　 Cortijo Conejo
assigned_from_geo　 true
backup　 true
bird_family　 Upuidae
bird_order　 Upupiformes
broken_eggs　 Missing: Not collected
brood_size　 Missing: Not collected
clutch_size　 8
code_id_statistica　 53
coll_date_juliane_days　 162
collection date　 6/12/07 0:00
collection_timestamp　 6/12/07
comments_in_spanish　 Abandonados
common name　 organismal metagenome
country　 GAZ:Spain
country_nation　 Spain
country_region　 Hoya de Guadix
culturing_date　 6/28/07
depth　 0
dna_extracted　 true
elevation　 1055
empo_0　 EMP sample
empo_1　 Host-associated
empo_2　 Animal
empo_3　 Animal surface
enterobacteriaceae_density　 423238.8274
enterococcus_density　 123630.2891
env biome　 mediterranean shrubland biome
env feature　 nest of bird
env matter　 egg
env package　 host-associated
eppendorf_name　 CA47.1
estefania_plates　 6G05
extracted DNA avail now　 true
feathers　 false
fledge_success_brood　 Missing: Not collected
fledge_success_clutch　 Missing: Not collected
fledging_date　 Missing: Not collected
geo loc name　 Spain:Hoya de Guadix
hatching_date　 Missing: Not collected
hatching_success　 Missing: Not collected
hatching_synchrony　 asyn
host common name　 Eurasian hoopoe
host scientific name　 Upupiformes
host subject id　 Abubilla.CA47.1
host taxid　 57439
latitude　 37.40583611
lay_date_juliane_days　 Missing: Not provided
laying_date　 Missing: Not provided
log_enterobacteriaceae_density　 5.626586529
log_enterococcus_density　 5.092128397
log_mesophiles_density　 6.125983477
log_rel_growth_enterobact　 Missing: Not provided
log_rel_growth_enterococcus　 Missing: Not provided
log_rel_growth_mesophiles　 Missing: Not provided
log_rel_growth_staphylococcus　 Missing: Not provided
log_staphylococcus_density　 2.266642633
longitude　 -3.082122222
mesophiles_density　 1336543.665
nest_type　 hole
number_fledging　 Missing: Not provided
number_sampled_eggs　 8
observer　 Juanma
physical_specimen_location　 CCME
physical_specimen_remaining　 true
plants　 false
platero_plates　 P6A09
predated　 No
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1632:1632.E6G05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type　 bird egg shell
sample_nest　 Abubilla.CA47.1
sample_progress　 sequenced (16S)
sampling time　 1
sampling_code_id　 610
species name　 Upupa epops
staphylococcus_density　 183.774754
storing_days　 16
unhatched_eggs　 Missing: Not provided
year　 2007
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14786
sra-run　 ERR1530302
sra-submission　 ERA674159
biosample　 SAMEA4076628
sra-study　 ERP016455
sra-experiment　 ERX1601194
distribution JSONJSON-LD
Download
ERA674159.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-14T15:50:18Z
dateModified 2021-09-24T10:02:59Z
datePublished 2016-07-14T16:24:12Z