home > sra-sample > ERS1261218
identifier ERS1261218
type sra-sample
sameAs
biosample　 SAMEA4349769
organism soil metagenome
attributes
ENA first public　 2016-07-20
ENA last update　 2016-07-19
External Id　 SAMEA4349769
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-20T17:01:22Z
INSDC last update　 2016-07-19T22:29:16Z
INSDC status　 public
Submitter Id　 qiita_sid_1038:1038.CH2
altitude　 0
annual_season_precpt　 2530
annual_season_temp　 10.3
anonymized name　 CH2
assigned_from_geo　 true
collection_timestamp　 06/30/2011
common name　 soil metagenome
country　 USA: GAZ
cur_land_use　 tree cover
cur_vegetation　 Tsuga heterophylla
cur_vegetation_meth　 US Taxonomy
depth　 0-0.15
dna_extracted　 true
drainage_class　 well
elevation　 281
env biome　 forest biome
env feature　 forest soil
env matter　 soil
env package　 soil
env_material　 soil
extracted DNA avail now　 true
fire　 more than 250 years
host subject id　 CH2
latitude　 45.06
longitude　 -123.94
microbial biomass　 1230
microbial_biomass_meth　 Chloroform fumigation-incubation
microbial_biomass_unit　 mg C per kg
ph　 3.8
ph_meth　 0.01 M CaCl2, 2:1 solution: soil
physical_specimen_location　 LBNL
physical_specimen_remaining　 true
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_1038:1038.CH2
sample type　 Soil
sample_progress　 sequenced (16S)
sieving　 true
soil type　 Histic Epiaquands
soil_type_meth　 US Taxonomy
store_cond　 frozen - 20 C
tot_n_meth　 combustion
tot_nitro　 Missing: Not provided
tot_org_c_meth　 Missing: Not provided
tot_org_carb　 Missing: Not provided
water_content_soil　 1.472
water_content_soil_meth　 gravimetric
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14862
sra-run　 ERR1543596
sra-submission　 ERA676195
biosample　 SAMEA4349769
sra-study　 ERP016539
sra-experiment　 ERX1614361
distribution JSONJSON-LD
Download
ERA676195.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-21T12:35:07Z
dateModified 2021-09-24T10:33:19Z
datePublished 2016-07-21T13:11:11Z