home > sra-sample > ERS1265588
identifier ERS1265588
type sra-sample
sameAs
biosample　 SAMEA4354139
organism soil metagenome
attributes
ENA first public　 2016-07-24
ENA last update　 2016-07-23
External Id　 SAMEA4354139
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-24T17:01:54Z
INSDC last update　 2016-07-23T06:23:37Z
INSDC status　 public
Submitter Id　 qiita_sid_10180:10180.A15I
activated_carbon　 false
altitude　 0
anonymized name　 A15I
assigned_from_geo　 true
base saturation　 65
calcium　 48.5
cation_ex_capacity　 102.35
claysand_g_per_kg　 739.5
collection_timestamp　 Missing: Not provided
common name　 soil metagenome
country　 GAZ:Brazil
cur_land_use　 crop cover
cur_vegetation　 sugar cane
depth　 0
dna_exracted　 true
dna_extracted　 true
elevation　 400-600
env biome　 cropland biome
env feature　 agricultural soil
env matter　 soil
env package　 soil
env_material　 soil
extracted DNA avail now　 true
filter_cake　 false
geo loc name　 Brazil:Sao Paulo
has_extracted_data　 true
has_physical_specimen　 true
host common name　 soil
host subject id　 A15I
host taxid　 410658
hydrogen_and_aluminum　 36
latitude　 -22.8642
longitude　 -50.5003
magnesium　 14
mechanized_harvesting　 true
mineral_fertilizers　 true
ph　 5.25
ph_meth　 CaCl12
phosphorus　 16.5
physical samp avail now　 true
physical_specimen_location　 PNNL
physical_specimen_remaining　 false
potassium　 3.85
productivity_tons_per_hectare　 58
public　 true
required_sample_info_status　 completed
sample name　 qiita_sid_10180:10180.A15I
sample type　 soil
sample_progress　 sequenced 16S
sand_g_per_kg　 121.5
silt_g_per_k　 139
soil_organic_matter_g_per_cubic_dm　 29
sugarcane_burning　 true
sum_of_bases　 66.35
temp　 20
time_land_use_years　 10
vinasse　 true
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14901
sra-run　 ERR1546116
sra-submission　 ERA678274
biosample　 SAMEA4354139
sra-study　 ERP016582
sra-experiment　 ERX1616886
distribution JSONJSON-LD
Download
ERA678274.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:08:39Z
dateModified 2021-09-24T10:48:30Z
datePublished 2016-07-25T16:12:13Z