home > sra-sample > ERS1265741
identifier ERS1265741
type sra-sample
sameAs
biosample  SAMEA4354292
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354292
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:22Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.22
anonymized name  22
calcium  3.82
carbon_percent  0.32846
ch4_flux  0.027974741
co2_ch4_flux_units  ug C/g soil/day
co2_flux  7.22909697
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.092
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  418
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  4.81
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  22
host taxid  1325974
hydrogen  3.37
k_na_ca_mg_h_units  maq/100g
latitude  42.085836
longitude  -76.440406
magnesium  0.62
microbial_biomass_c  181.4339505
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  0.965263149
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.08263
per_gram_dry_soil_per_hour  10.96040275
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  58.77
ph  6.92
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B10
potassium  0.29
potential_exchange_capacity  8.18
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  0.005708975
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  -1.46664E-4
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  7.22909697
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.22
sample type  wetland soil
sodium  0.08
soil_nh4  0.640792435
soil_no3  0.26048473
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  0.901277164
texture_125  14.250832
texture_2  4.529078
texture_20  16.613837
texture_200  4.281824
texture_2000  10.150606
texture_63  25.163412
texture_630  14.553813
texture_6300  0
texture_6point3  10.456598
tot_org_carb_percent  0.3228
total n  0.958366917
total_carbon_percent  0.3419
total_inorganic_carbon_percent  0.0192
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546269
sra-submission  ERA678275
biosample  SAMEA4354292
sra-study  ERP016583
sra-experiment  ERX1617039
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:44Z
dateModified 2021-09-24T10:48:58Z
datePublished 2016-07-25T16:13:13Z