home > sra-sample > ERS1265742
identifier ERS1265742
type sra-sample
sameAs
biosample  SAMEA4354293
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354293
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:22Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.23
anonymized name  23
calcium  9.81
carbon_percent  1.8034
ch4_flux  0.040795187
co2_ch4_flux_units  ug C/g soil/day
co2_flux  6.820537712
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.234
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  134.1
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  11.27
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  23
host taxid  1325974
hydrogen  2.06
k_na_ca_mg_h_units  maq/100g
latitude  43.044491
longitude  -76.663544
magnesium  1.17
microbial_biomass_c  187.9336267
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  0.553129176
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.0953
per_gram_dry_soil_per_hour  2.254462122
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  84.55
ph  7.56
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_B11
potassium  0.22
potential_exchange_capacity  13.33
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  3.862164719
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.878410723
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  6.820537712
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.23
sample type  wetland soil
sodium  0.08
soil_nh4  0.269959697
soil_no3  0.269959697
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  0.539919395
texture_125  28.566984
texture_2  7.515405
texture_20  13.517246
texture_200  14.400145
texture_2000  0.069283
texture_63  17.219783
texture_630  6.486403
texture_6300  0
texture_6point3  12.224752
tot_org_carb_percent  1.0014
total n  39.16156659
total_carbon_percent  1.683
total_inorganic_carbon_percent  0.6814
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546270
sra-submission  ERA678275
biosample  SAMEA4354293
sra-study  ERP016583
sra-experiment  ERX1617040
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:44Z
dateModified 2021-09-24T10:50:57Z
datePublished 2016-07-25T16:13:13Z