home > sra-sample > ERS1265759
identifier ERS1265759
type sra-sample
sameAs
biosample  SAMEA4354310
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354310
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.2S1
anonymized name  2S1
calcium  10.23
carbon_percent  2.5929
ch4_flux  Missing: Not provided
co2_ch4_flux_units  ug C/g soil/day
co2_flux  Missing: Not provided
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  Missing: Not provided
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  146
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  12.43
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  2S1
host taxid  1325974
hydrogen  6.52
k_na_ca_mg_h_units  maq/100g
latitude  42.9269583
longitude  -76.8569278
magnesium  1.87
microbial_biomass_c  230.359425
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  4.161080443
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.11323
per_gram_dry_soil_per_hour  10.558
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  100
ph  Missing: Not provided
ph method  H2O
ph_cacl2  7.15
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_H3
potassium  0.28
potential_exchange_capacity  12.43
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.006846821
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  -0.00342341
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  3.187864521
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.2S1
sample type  wetland soil
sodium  0.05
soil_nh4  0.311644247
soil_no3  0.311644247
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  0.623288493
texture_125  Missing: Not replaced
texture_2  Missing: Not replaced
texture_20  Missing: Not replaced
texture_200  Missing: Not replaced
texture_2000  Missing: Not replaced
texture_63  Missing: Not replaced
texture_630  Missing: Not replaced
texture_6300  Missing: Not applicable
texture_6point3  Missing: Not replaced
tot_org_carb_percent  1.3792
total n  0.547973464
total_carbon_percent  2.514
total_inorganic_carbon_percent  1.135
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546287
sra-submission  ERA678275
biosample  SAMEA4354310
sra-study  ERP016583
sra-experiment  ERX1617057
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:48Z
dateModified 2021-09-24T10:51:01Z
datePublished 2016-07-25T16:13:13Z