home > sra-sample > ERS1265769
identifier ERS1265769
type sra-sample
sameAs
biosample  SAMEA4354320
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354320
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.3
anonymized name  3
calcium  5.84
carbon_percent  0.90898
ch4_flux  0.024558926
co2_ch4_flux_units  ug C/g soil/day
co2_flux  15.61185644
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.333
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  453.6
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  7.43
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  3
host taxid  1325974
hydrogen  2.94
k_na_ca_mg_h_units  maq/100g
latitude  42.4437417
longitude  -76.7584417
magnesium  1.2
microbial_biomass_c  304.1891693
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  33.75461142
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.11636
per_gram_dry_soil_per_hour  237.4946434
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  71.65
ph  7.39
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A3
potassium  0.27
potential_exchange_capacity  10.37
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -1.598570761
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.527292674
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  15.61185644
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.3
sample type  wetland soil
sodium  0.12
soil_nh4  21.54186115
soil_no3  0.27831862
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  21.82017977
texture_125  7.543108
texture_2  5.194544
texture_20  13.062555
texture_200  8.900799
texture_2000  7.91449
texture_63  10.830151
texture_630  35.723751
texture_6300  0
texture_6point3  10.8306
tot_org_carb_percent  0.67
total n  5.834472161
total_carbon_percent  0.8846
total_inorganic_carbon_percent  0.2146
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546297
sra-submission  ERA678275
biosample  SAMEA4354320
sra-study  ERP016583
sra-experiment  ERX1617067
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:51Z
dateModified 2021-09-24T10:51:03Z
datePublished 2016-07-25T16:13:13Z