home > sra-sample > ERS1265772
identifier ERS1265772
type sra-sample
sameAs
biosample  SAMEA4354323
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354323
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.32
anonymized name  32
calcium  15.27
carbon_percent  2.8338
ch4_flux  0.020846755
co2_ch4_flux_units  ug C/g soil/day
co2_flux  7.337364595
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.099
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  453.9
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  16.31
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  32
host taxid  1325974
hydrogen  1.93
k_na_ca_mg_h_units  maq/100g
latitude  42.443619
longitude  -76.758484
magnesium  0.79
microbial_biomass_c  125.1217071
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  2.650182642
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.02086
per_gram_dry_soil_per_hour  9.856215799
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  89.4
ph  8.39
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_C8
potassium  0.19
potential_exchange_capacity  18.25
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  5.610030809
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  1.630488177
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  7.337364595
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.32
sample type  wetland soil
sodium  0.06
soil_nh4  2.942525004
soil_no3  0.238841315
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  3.181366319
texture_125  9.586622
texture_2  16.105881
texture_20  26.342265
texture_200  5.956156
texture_2000  0.650938
texture_63  13.426943
texture_630  2.987758
texture_6300  0
texture_6point3  24.943437
tot_org_carb_percent  0.1193
total n  59.2816744
total_carbon_percent  2.631
total_inorganic_carbon_percent  2.5121
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546300
sra-submission  ERA678275
biosample  SAMEA4354323
sra-study  ERP016583
sra-experiment  ERX1617070
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:51Z
dateModified 2021-09-24T10:51:04Z
datePublished 2016-07-25T16:13:13Z