home > sra-sample > ERS1265773
identifier ERS1265773
type sra-sample
sameAs
biosample  SAMEA4354324
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354324
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.33
anonymized name  33
calcium  14.38
carbon_percent  3.5261
ch4_flux  0.025642209
co2_ch4_flux_units  ug C/g soil/day
co2_flux  5.448690795
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.366
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  113
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  18.61
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  33
host taxid  1325974
hydrogen  9.12
k_na_ca_mg_h_units  maq/100g
latitude  43.169476
longitude  -75.934578
magnesium  3.63
microbial_biomass_c  928.8867166
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  128.6778618
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.30729
per_gram_dry_soil_per_hour  25.90083526
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  67.11
ph  6.85
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_C9
potassium  0.51
potential_exchange_capacity  27.73
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -7.595317368
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.685611632
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  5.448690795
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.33
sample type  wetland soil
sodium  0.08
soil_nh4  105.3158513
soil_no3  0.348727984
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  105.6645793
texture_125  10.693897
texture_2  2.090998
texture_20  5.226923
texture_200  10.993138
texture_2000  24.956177
texture_63  7.881056
texture_630  35.022001
texture_6300  0
texture_6point3  3.135809
tot_org_carb_percent  2.8815
total n  29.71140558
total_carbon_percent  3.338
total_inorganic_carbon_percent  0.4561
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546301
sra-submission  ERA678275
biosample  SAMEA4354324
sra-study  ERP016583
sra-experiment  ERX1617071
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:52Z
dateModified 2021-09-24T10:51:04Z
datePublished 2016-07-25T16:13:13Z