home > sra-sample > ERS1265775
identifier ERS1265775
type sra-sample
sameAs
biosample  SAMEA4354326
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354326
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.35
anonymized name  35
calcium  7.86
carbon_percent  0.90459
ch4_flux  0.03371155
co2_ch4_flux_units  ug C/g soil/day
co2_flux  12.78726404
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.184
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  372.6
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  28.18
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  35
host taxid  1325974
hydrogen  9.1
k_na_ca_mg_h_units  maq/100g
latitude  42.646271
longitude  -75.781631
magnesium  19.22
microbial_biomass_c  287.6750294
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  9.420721261
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.13291
per_gram_dry_soil_per_hour  22.95051821
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  75.59
ph  6.9
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_C11
potassium  0.5
potential_exchange_capacity  37.28
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.88126178
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.040118614
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  12.78726404
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.35
sample type  wetland soil
sodium  0.6
soil_nh4  10.95584897
soil_no3  0.394095287
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  11.34994425
texture_125  1.143351
texture_2  38.671335
texture_20  12.232375
texture_200  0.896151
texture_2000  1.058906
texture_63  6.228719
texture_630  6.037896
texture_6300  0
texture_6point3  33.731266
tot_org_carb_percent  0.7824
total n  2.537326454
total_carbon_percent  0.8263
total_inorganic_carbon_percent  0.0439
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546303
sra-submission  ERA678275
biosample  SAMEA4354326
sra-study  ERP016583
sra-experiment  ERX1617073
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:52Z
dateModified 2021-09-24T10:51:04Z
datePublished 2016-07-25T16:13:14Z