home > sra-sample > ERS1265778
identifier ERS1265778
type sra-sample
sameAs
biosample  SAMEA4354329
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354329
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.38
anonymized name  38
calcium  26.09
carbon_percent  8.672
ch4_flux  0.032202268
co2_ch4_flux_units  ug C/g soil/day
co2_flux  8.582968284
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.216
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  408.9
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  33.98
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  38
host taxid  1325974
hydrogen  16.24
k_na_ca_mg_h_units  maq/100g
latitude  42.095215
longitude  -76.416199
magnesium  7.53
microbial_biomass_c  569.2046927
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  27.64646225
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.55299
per_gram_dry_soil_per_hour  10.55008714
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  67.66
ph  6.26
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D2
potassium  0.2
potential_exchange_capacity  50.22
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  5.422922656
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  -0.324533611
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  8.582968284
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.38
sample type  wetland soil
sodium  0.15
soil_nh4  10.22720247
soil_no3  3.718113795
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  13.94531627
texture_125  9.705135
texture_2  14.68233
texture_20  21.675417
texture_200  2.52165
texture_2000  0.868063
texture_63  25.743381
texture_630  5.345106
texture_6300  0
texture_6point3  19.458919
tot_org_carb_percent  7.9609
total n  68.17454283
total_carbon_percent  8.153
total_inorganic_carbon_percent  0.1923
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546306
sra-submission  ERA678275
biosample  SAMEA4354329
sra-study  ERP016583
sra-experiment  ERX1617076
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:53Z
dateModified 2021-09-24T10:51:05Z
datePublished 2016-07-25T16:13:14Z