home > sra-sample > ERS1265779
identifier ERS1265779
type sra-sample
sameAs
biosample  SAMEA4354330
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354330
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:23Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.39
anonymized name  39
calcium  11.82
carbon_percent  4.5118
ch4_flux  0.141537784
co2_ch4_flux_units  ug C/g soil/day
co2_flux  26.0147181
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.226
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  408.9
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  15.66
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  39
host taxid  1325974
hydrogen  14.24
k_na_ca_mg_h_units  maq/100g
latitude  42.095215
longitude  -76.416199
magnesium  3.49
microbial_biomass_c  593.4855775
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  51.21081731
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.4378
per_gram_dry_soil_per_hour  284.8738243
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  52.38
ph  5.95
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D3
potassium  0.19
potential_exchange_capacity  29.9
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -1.983890637
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.748187288
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  26.0147181
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.39
sample type  wetland soil
sodium  0.17
soil_nh4  50.01258778
soil_no3  0.548383638
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  50.56097142
texture_125  7.3888
texture_2  14.291904
texture_20  25.176717
texture_200  2.450927
texture_2000  1.161028
texture_63  20.752912
texture_630  7.079319
texture_6300  0
texture_6point3  21.698392
tot_org_carb_percent  4.143
total n  30.72206505
total_carbon_percent  4.27
total_inorganic_carbon_percent  0.1266
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546307
sra-submission  ERA678275
biosample  SAMEA4354330
sra-study  ERP016583
sra-experiment  ERX1617077
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:53Z
dateModified 2021-09-24T10:51:06Z
datePublished 2016-07-25T16:13:14Z