home > sra-sample > ERS1265800
identifier ERS1265800
type sra-sample
sameAs
biosample  SAMEA4354351
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354351
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.4
anonymized name  4
calcium  2.97
carbon_percent  1.5271
ch4_flux  0.098446927
co2_ch4_flux_units  ug C/g soil/day
co2_flux  10.94706651
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.071
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  408.7
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  3.93
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  4
host taxid  1325974
hydrogen  10.3
k_na_ca_mg_h_units  maq/100g
latitude  42.0956167
longitude  -76.4162083
magnesium  0.61
microbial_biomass_c  356.2633351
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  17.13545247
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.15202
per_gram_dry_soil_per_hour  31.37646528
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  27.6
ph  5.67
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A4
potassium  0.25
potential_exchange_capacity  14.23
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.208742595
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.046689315
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  10.94706651
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.4
sample type  wetland soil
sodium  0.1
soil_nh4  18.95369362
soil_no3  0.37606535
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  19.32975897
texture_125  15.021701
texture_2  6.819204
texture_20  23.793234
texture_200  3.765835
texture_2000  1.889234
texture_63  28.662558
texture_630  4.62886
texture_6300  0
texture_6point3  15.419374
tot_org_carb_percent  1.4625
total n  17.24233301
total_carbon_percent  1.489
total_inorganic_carbon_percent  0.0263
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546328
sra-submission  ERA678275
biosample  SAMEA4354351
sra-study  ERP016583
sra-experiment  ERX1617098
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:58Z
dateModified 2021-09-24T10:51:11Z
datePublished 2016-07-25T16:13:14Z