home > sra-sample > ERS1265804
identifier ERS1265804
type sra-sample
sameAs
biosample  SAMEA4354355
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354355
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.43
anonymized name  43
calcium  8.94
carbon_percent  0.68265
ch4_flux  0.023764645
co2_ch4_flux_units  ug C/g soil/day
co2_flux  17.24092052
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.227
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  423.2
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  12.17
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  43
host taxid  1325974
hydrogen  2.04
k_na_ca_mg_h_units  maq/100g
latitude  42.195763
longitude  -76.090363
magnesium  2.76
microbial_biomass_c  237.0651107
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  5.86495332
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.07927
per_gram_dry_soil_per_hour  39.66523526
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  85.64
ph  7.62
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D7
potassium  0.36
potential_exchange_capacity  14.21
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  1.704945867
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.657706553
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  17.24092052
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.43
sample type  wetland soil
sodium  0.11
soil_nh4  1.207905912
soil_no3  0.311315957
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  1.519221869
texture_125  20.95157
texture_2  6.526922
texture_20  9.071015
texture_200  21.750946
texture_2000  1.496861
texture_63  7.94721
texture_630  23.643175
texture_6300  0
texture_6point3  8.6123
tot_org_carb_percent  0.5686
total n  18.56868054
total_carbon_percent  0.6413
total_inorganic_carbon_percent  0.0727
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546332
sra-submission  ERA678275
biosample  SAMEA4354355
sra-study  ERP016583
sra-experiment  ERX1617102
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:59Z
dateModified 2021-09-24T10:51:12Z
datePublished 2016-07-25T16:13:14Z