home > sra-sample > ERS1265807
identifier ERS1265807
type sra-sample
sameAs
biosample  SAMEA4354358
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354358
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.45
anonymized name  45
calcium  4.1
carbon_percent  0.81795
ch4_flux  0.055797757
co2_ch4_flux_units  ug C/g soil/day
co2_flux  13.06651912
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.073
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  511.4
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  4.91
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  45
host taxid  1325974
hydrogen  5.7
k_na_ca_mg_h_units  maq/100g
latitude  42.5832444
longitude  -75.9872167
magnesium  0.52
microbial_biomass_c  232.5800679
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  2.107082923
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.11648
per_gram_dry_soil_per_hour  2.127885246
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  46.3
ph  6.57
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D9
potassium  0.22
potential_exchange_capacity  10.61
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  0.035704609
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  -0.028335329
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  13.06651912
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.45
sample type  wetland soil
sodium  0.07
soil_nh4  6.686503567
soil_no3  0.588640912
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  7.275144479
texture_125  9.297167
texture_2  10.339571
texture_20  26.031709
texture_200  3.393953
texture_2000  0.68325
texture_63  21.312631
texture_630  7.055332
texture_6300  0
texture_6point3  21.886387
tot_org_carb_percent  0.7097
total n  7.632190574
total_carbon_percent  0.7589
total_inorganic_carbon_percent  0.0492
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546335
sra-submission  ERA678275
biosample  SAMEA4354358
sra-study  ERP016583
sra-experiment  ERX1617105
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:59Z
dateModified 2021-09-24T10:51:13Z
datePublished 2016-07-25T16:13:14Z