home > sra-sample > ERS1265808
identifier ERS1265808
type sra-sample
sameAs
biosample  SAMEA4354359
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354359
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.46
anonymized name  46
calcium  2.21
carbon_percent  1.3463
ch4_flux  0.087067539
co2_ch4_flux_units  ug C/g soil/day
co2_flux  10.19304573
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.06
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  516.9
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  2.71
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  46
host taxid  1325974
hydrogen  9.58
k_na_ca_mg_h_units  maq/100g
latitude  42.5828972
longitude  -75.9856917
magnesium  0.25
microbial_biomass_c  207.4672347
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  7.450824483
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.15234
per_gram_dry_soil_per_hour  2.797629029
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  22.08
ph  5.85
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D10
potassium  0.18
potential_exchange_capacity  12.29
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.687667578
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.128082533
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  10.19304573
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.46
sample type  wetland soil
sodium  0.07
soil_nh4  9.690213884
soil_no3  0.789572983
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  10.47978687
texture_125  9.825807
texture_2  9.444269
texture_20  25.597259
texture_200  2.622795
texture_2000  2.291201
texture_63  24.660424
texture_630  5.636292
texture_6300  0
texture_6point3  19.921954
tot_org_carb_percent  1.194
total n  3.603111087
total_carbon_percent  1.218
total_inorganic_carbon_percent  0.0239
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546336
sra-submission  ERA678275
biosample  SAMEA4354359
sra-study  ERP016583
sra-experiment  ERX1617106
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:59Z
dateModified 2021-09-24T10:51:13Z
datePublished 2016-07-25T16:13:14Z