home > sra-sample > ERS1265809
identifier ERS1265809
type sra-sample
sameAs
biosample  SAMEA4354360
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354360
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:54Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.47
anonymized name  47
calcium  2.2
carbon_percent  4.8714
ch4_flux  0.0666997
co2_ch4_flux_units  ug C/g soil/day
co2_flux  33.069358
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.094
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  558
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  2.8
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  47
host taxid  1325974
hydrogen  20.34
k_na_ca_mg_h_units  maq/100g
latitude  42.647281
longitude  -75.746508
magnesium  0.38
microbial_biomass_c  736.3123389
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  77.49104987
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.34327
per_gram_dry_soil_per_hour  126.3369883
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  12.1
ph  5.06
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_D11
potassium  0.14
potential_exchange_capacity  23.14
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  33.069358
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.47
sample type  wetland soil
sodium  0.08
soil_nh4  26.50781296
soil_no3  1.779291555
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  28.28710452
texture_125  6.981532
texture_2  9.102759
texture_20  33.260882
texture_200  3.236882
texture_2000  0.095463
texture_63  21.022438
texture_630  4.081415
texture_6300  0
texture_6point3  22.218629
tot_org_carb_percent  4.5158
total n  Missing: Not replaced
total_carbon_percent  4.593
total_inorganic_carbon_percent  0.0776
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546337
sra-submission  ERA678275
biosample  SAMEA4354360
sra-study  ERP016583
sra-experiment  ERX1617107
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:09:59Z
dateModified 2021-09-24T10:51:13Z
datePublished 2016-07-25T16:13:14Z