home > sra-sample > ERS1265824
identifier ERS1265824
type sra-sample
sameAs
biosample  SAMEA4354375
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354375
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:24Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.5
anonymized name  5
calcium  3.05
carbon_percent  1.3429
ch4_flux  0.032634674
co2_ch4_flux_units  ug C/g soil/day
co2_flux  7.258767933
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.114
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  406
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  3.98
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  5
host taxid  1325974
hydrogen  6.38
k_na_ca_mg_h_units  maq/100g
latitude  42.0966806
longitude  -76.4163861
magnesium  0.63
microbial_biomass_c  236.1726239
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  15.38657529
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.11829
per_gram_dry_soil_per_hour  12.22309585
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  38.4
ph  5.84
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_A5
potassium  0.15
potential_exchange_capacity  10.36
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  0.214665192
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  0.003289124
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  7.258767933
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.5
sample type  wetland soil
sodium  0.16
soil_nh4  20.27518646
soil_no3  0.372705634
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  20.6478921
texture_125  13.021305
texture_2  6.449078
texture_20  24.546115
texture_200  3.145433
texture_2000  2.520096
texture_63  29.927492
texture_630  6.265466
texture_6300  0
texture_6point3  14.125015
tot_org_carb_percent  1.2638
total n  22.79454402
total_carbon_percent  1.294
total_inorganic_carbon_percent  0.0297
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546352
sra-submission  ERA678275
biosample  SAMEA4354375
sra-study  ERP016583
sra-experiment  ERX1617122
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:10:03Z
dateModified 2021-09-24T10:51:16Z
datePublished 2016-07-25T16:13:14Z