home > sra-sample > ERS1265826
identifier ERS1265826
type sra-sample
sameAs
biosample  SAMEA4354377
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354377
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:25Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.51
anonymized name  51
calcium  11.81
carbon_percent  4.1407
ch4_flux  0.02174414
co2_ch4_flux_units  ug C/g soil/day
co2_flux  6.744464323
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.116
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  386
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  14.26
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  51
host taxid  1325974
hydrogen  -2.7
k_na_ca_mg_h_units  maq/100g
latitude  42.385921
longitude  -76.308159
magnesium  2.06
microbial_biomass_c  107.3788669
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  0.585969459
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.04234
per_gram_dry_soil_per_hour  -0.762822805
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  123.35
ph  8.37
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_E3
potassium  0.31
potential_exchange_capacity  11.56
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  3.76131E-4
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  1.88066E-4
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  6.744464323
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.51
sample type  wetland soil
sodium  0.08
soil_nh4  0.253787982
soil_no3  0.253787982
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  0.507575965
texture_125  7.196003
texture_2  19.575181
texture_20  23.679502
texture_200  7.053075
texture_2000  0
texture_63  10.335609
texture_630  6.19654
texture_6300  0
texture_6point3  25.96409
tot_org_carb_percent  0.1886
total n  0.511337276
total_carbon_percent  3.849
total_inorganic_carbon_percent  3.6602
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546354
sra-submission  ERA678275
biosample  SAMEA4354377
sra-study  ERP016583
sra-experiment  ERX1617124
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:10:04Z
dateModified 2021-09-24T10:51:17Z
datePublished 2016-07-25T16:13:14Z