home > sra-sample > ERS1265829
identifier ERS1265829
type sra-sample
sameAs
biosample  SAMEA4354380
organism wetland metagenome
attributes
ENA first public  2016-07-24
ENA last update  2016-07-23
External Id  SAMEA4354380
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-24T17:01:55Z
INSDC last update  2016-07-23T06:54:25Z
INSDC status  public
Submitter Id  qiita_sid_10156:10156.54
anonymized name  54
calcium  10.88
carbon_percent  4.1141
ch4_flux  0.050636584
co2_ch4_flux_units  ug C/g soil/day
co2_flux  16.81495336
collection_timestamp  Missing: Not provided
common name  wetland metagenome
conductivity  0.247
conductivity_units  mS/cm
country  GAZ:United States of America
depth  0
dna_extracted  true
elevation  393
env biome  freshwater biome
env feature  freshwater wetland
env matter  soil
env package  soil
env_material  soil
exchange_capacity  12.4
exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos
extracted DNA avail now  true
geo loc name  USA:NY
has_extracted_data  true
has_physical_specimen  true
host common name  wetland metagenome
host subject id  54
host taxid  1325974
hydrogen  10.88
k_na_ca_mg_h_units  maq/100g
latitude  42.883018
longitude  -75.953537
magnesium  1.07
microbial_biomass_c  794.5879698
microbial_biomass_c_units  ugC/g soil
microbial_biomass_n  93.81392193
microbial_biomass_n_units  ug N/g dry soil
nitrogen_percent  0.43213
per_gram_dry_soil_per_hour  133.3280218
per_gram_dry_soil_per_hour_units  ng N/g soil/hour
percent_base_saturation  53.27
ph  6.28
ph method  H2O
ph_cacl2  Missing: Not applicable
physical_specimen_location  CornellU
physical_specimen_remaining  true
plate_coordinates  PLATE1_E6
potassium  0.31
potential_exchange_capacity  23.28
potential_exchange_capacity_ions  Ca2 pos, Mg2 pos, K pos, Na pos, H pos
potential_net_n_mineralization  -0.510098573
potential_net_n_mineralization_units  ug-N/g dry soil/day
potential_net_nitrification  1.958509127
potential_net_nitrification_units  ug-N/g dry soil/day
public  true
required_sample_info_status  completed
respiration  16.81495336
respiration_units  ug C/g soil/day
sample name  qiita_sid_10156:10156.54
sample type  wetland soil
sodium  0.14
soil_nh4  60.98892222
soil_no3  0.796802769
soil_no3_nh4_tin_total_n_units  ug-N/g dry soil
soil_tin  61.78572499
texture_125  1.098648
texture_2  16.337049
texture_20  34.362874
texture_200  0.255865
texture_2000  0.231113
texture_63  9.296652
texture_630  1.610222
texture_6300  0
texture_6point3  36.807577
tot_org_carb_percent  3.7923
total n  56.68473926
total_carbon_percent  3.885
total_inorganic_carbon_percent  0.0927
properties 
{...}
dbXrefs
bioproject  PRJEB14902
sra-run  ERR1546357
sra-submission  ERA678275
biosample  SAMEA4354380
sra-study  ERP016583
sra-experiment  ERX1617127
distribution JSONJSON-LD
Download
ERA678275.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-25T15:10:04Z
dateModified 2021-09-24T10:51:17Z
datePublished 2016-07-25T16:13:14Z