home > sra-sample > ERS1268947
identifier ERS1268947
type sra-sample
sameAs
biosample  SAMEA4357498
organism human vaginal metagenome
attributes
ENA first public  2016-07-29
ENA last update  2016-07-27
External Id  SAMEA4357498
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2016-07-29T17:01:13Z
INSDC last update  2016-07-27T07:19:12Z
INSDC status  public
Submitter Id  qiita_sid_2024:2024.final.MNIH60N.BFG10W.V
adult_infant  adult
age  20
age unit  years
altitude  0
anonymized name  MNIH60N
assigned_from_geo  true
bmi  22.43
body habitat  UBERON:genito-urinary system
body product  UBERON:mucus
body site  UBERON:vagina
bp_dia  70
bp_sys  110
bv_results  p
collection_timestamp  02/13/2013
comments  Given ALU and PCM, has headachesa dn dizziness
common name  vagina metagenome
compliance  nan
country  Tanzania: GAZ
date extracted  10.29.13
date_delivery  5-Feb-13
depth  0
dna_extracted  true
dob  04.14.92
elevation  1147
env biome  dense settlement biome
env feature  hospital
env matter  mucus
env package  host-associated
env_material  mucus
fetal_hb  Missing: Not recorded
fetal_movement_24h  Missing: Not recorded
fetal_presentation  Missing: Not recorded
fundal_size  Missing: Not recorded
gestation_time  Missing: Not recorded
has_extracted_data  true
has_physical_specimen  true
head_circumference_2  Missing: Not recorded
head_circumfrence_1  36.5
head_circumfrence_2  nan
height or length  1.58
hemoglobin  97
history_cong  Missing: Not recorded
history_sub_fert  Missing: Not recorded
hiv  2
host common name  human
host scientific name  Homo sapiens
host subject id  MNIH60N
host taxid  9606
ideal_weight  MIssing: Not provided
infant_alive_deceased  y
last_period  MIssing: Not provided
latitude  2.75
length_infant_1  52
length_infant_2  MIssing: Not provided
lims  BFG10W
live births  MIssing: Not provided
living_children  MIssing: Not provided
longitude  32.75
malaria  1
molar_preg  MIssing: Not provided
muac_infant_1  11
muac_infant_2  MIssing: Not provided
muac_mm  259
nausea  MIssing: Not provided
norm_fetal_mov  MIssing: Not provided
nourishment_status_group  nourished
nugent score  9
ob_complications  MIssing: Not provided
other_ob_history  MIssing: Not provided
perc_dev  MIssing: Not provided
physical samp avail now  true
physical_location  UWO
physical_specimen_location  UWO
physical_specimen_remaining  false
place_delivery  5
prev_pregnancies  MIssing: Not provided
public  false
pulse  77
required_sample_info_status  completed
resp_rate  20
sample name  qiita_sid_2024:2024.final.MNIH60N.BFG10W.V
sample type  vaginal
sex  female
sex_infant_1  male
spon_abortions  MIssing: Not provided
still_births  MIssing: Not provided
stool_parasite  1
syph  2
time_delivery  2300
tot_mass  56
urine_bilirubin  0
urine_blood  0
urine_haemolysis  Missing: Not reported
urine_ketone  0
urine_leukocyte  0
urine_nitrite  0
urine_ph  6.5
urine_protein  0
urine_spec_grav  1.02
urine_sugar  0
urine_urobilinogen  0
vag_delivery  MIssing: Not provided
vaginal_csection  2
vaginal_ph  5.5
weight_infant_1  3.45
well location  B6
well_plate  I
properties 
{...}
dbXrefs
bioproject  PRJEB14941
sra-run  ERR1550417
sra-submission  ERA678400
biosample  SAMEA4357498
sra-study  ERP016621
sra-experiment  ERX1621187
distribution JSONJSON-LD
Download
ERA678400.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-30T12:48:55Z
dateModified 2021-09-24T10:58:36Z
datePublished 2016-07-30T13:23:11Z