home > sra-sample > ERS1269113
identifier ERS1269113
type sra-sample
sameAs
biosample　 SAMEA4357664
organism human vaginal metagenome
attributes
ENA first public　 2016-07-29
ENA last update　 2016-07-27
External Id　 SAMEA4357664
INSDC center alias　 UCSDMI
INSDC center name　 University of California San Diego Microbiome Initiative
INSDC first public　 2016-07-29T17:01:14Z
INSDC last update　 2016-07-27T07:19:19Z
INSDC status　 public
Submitter Id　 qiita_sid_2024:2024.visit1.MNIH47N.BFB108.V
adult_infant　 adult
age　 28
age unit　 years
altitude　 0
anonymized name　 MNIH47N
assigned_from_geo　 true
bmi　 26.95
body habitat　 UBERON:genito-urinary system
body product　 UBERON:mucus
body site　 UBERON:vagina
bp_dia　 60
bp_sys　 90
bv_results　 n
c_sections　 0
collection_timestamp　 08/27/2012
common name　 vagina metagenome
compliance　 nan
country　 Tanzania: GAZ
date extracted　 10.29.13
date_delivery　 Missing: Not collected
date_recruitment　 08.27.12
depth　 0
dna_extracted　 true
dob　 05.13.84
ectopic_preg　 0
elect_term　 0
elevation　 1147
env biome　 dense settlement biome
env feature　 hospital
env matter　 mucus
env package　 host-associated
env_material　 mucus
est_delivery　 01.28.13
fetal_hb　 120
fetal_movement_24h　 1
fetal_presentation　 Missing: Not recorded
fundal_size　 10
gestation_time　 18
has_extracted_data　 true
has_physical_specimen　 true
head_circumference_2　 Missing: Not recorded
head_circumfrence_1　 Missing: Not recorded
head_circumfrence_2　 nan
height or length　 1.6
hemoglobin　 116
history_cong　 2
history_sub_fert　 2
hiv　 2
host common name　 human
host scientific name　 Homo sapiens
host subject id　 MNIH47N
host taxid　 9606
ideal_weight　 62.3
last_period　 04.24.12
latitude　 2.75
length_infant_1　 MIssing: Not provided
length_infant_2　 MIssing: Not provided
lims　 BFB108
live births　 0
living_children　 0
longitude　 32.75
malaria　 2
molar_preg　 0
muac_infant_1　 MIssing: Not provided
muac_infant_2　 MIssing: Not provided
muac_mm　 300
nausea　 2
norm_fetal_mov　 1
nourishment_status_group　 nourished
nugent score　 MIssing: Not provided
ob_complications　 0
other_ob_history　 2
perc_dev　 110.8
physical samp avail now　 true
physical_location　 UWO
physical_specimen_location　 UWO
physical_specimen_remaining　 false
place_delivery　 MIssing: Not provided
prev_pregnancies　 1
public　 false
pulse　 74
required_sample_info_status　 completed
resp_rate　 20
sample name　 qiita_sid_2024:2024.visit1.MNIH47N.BFB108.V
sample type　 vaginal
sex　 female
spon_abortions　 0
still_births　 0
stool_parasite　 1
syph　 2
time_delivery　 MIssing: Not provided
tot_mass　 69
urine_bilirubin　 0
urine_blood　 1
urine_haemolysis　 Missing: Not reported
urine_ketone　 0
urine_leukocyte　 500
urine_nitrite　 0
urine_ph　 8
urine_protein　 1
urine_spec_grav　 1.02
urine_sugar　 0
urine_urobilinogen　 0
vag_delivery　 0
vaginal_csection　 MIssing: Not provided
vaginal_ph　 5
well location　 D9
well_plate　 I
properties　▽ 
{...}
dbXrefs
bioproject　 PRJEB14941
sra-run　 ERR1550583
sra-submission　 ERA678400
biosample　 SAMEA4357664
sra-study　 ERP016621
sra-experiment　 ERX1621353
distribution JSONJSON-LD
Download
ERA678400.sample.xml　 HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-07-30T12:49:37Z
dateModified 2021-09-24T10:59:25Z
datePublished 2016-07-30T13:23:12Z