| ENA first public |
2016-07-29 |
| ENA last update |
2016-07-27 |
| External Id |
SAMEA4357991 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2016-07-29T17:01:14Z |
| INSDC last update |
2016-07-27T07:19:31Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_2024:2024.visit3.MNIH61O.BFD102.V |
| adult_infant |
adult |
| age |
36 |
| age unit |
years |
| altitude |
0 |
| anonymized name |
MNIH61O |
| antibiotic |
2 |
| assigned_from_geo |
true |
| bmi |
28.12 |
| body habitat |
UBERON:genito-urinary system |
| body product |
UBERON:mucus |
| body site |
UBERON:vagina |
| bp_dia |
60 |
| bp_sys |
100 |
| bv_results |
p |
| collection_timestamp |
10/10/2012 |
| comments |
Dr. Obedi suggests that swollen axellary lymph node could be breast cancer and has reccomended biopsy at bugando, also given benzaline injections for syphallis treatment |
| common name |
vagina metagenome |
| compliance |
nan |
| country |
Tanzania: GAZ |
| date extracted |
10.25.13 |
| date_delivery |
Missing: Not collected |
| depth |
0 |
| dna_extracted |
true |
| dob |
12.10.77 |
| elevation |
1147 |
| env biome |
dense settlement biome |
| env feature |
hospital |
| env matter |
mucus |
| env package |
host-associated |
| env_material |
mucus |
| fetal_hb |
120 |
| fetal_movement_24h |
1 |
| fetal_presentation |
1 |
| fundal_size |
26 |
| gestation_time |
Missing: Not recorded |
| has_extracted_data |
true |
| has_physical_specimen |
true |
| head_circumference_2 |
Missing: Not recorded |
| head_circumfrence_1 |
Missing: Not recorded |
| head_circumfrence_2 |
nan |
| height or length |
1.66 |
| hemoglobin |
125 |
| history_cong |
Missing: Not recorded |
| history_sub_fert |
Missing: Not recorded |
| hiv |
nan |
| host common name |
human |
| host scientific name |
Homo sapiens |
| host subject id |
MNIH61O |
| host taxid |
9606 |
| ideal_weight |
MIssing: Not provided |
| last_period |
MIssing: Not provided |
| latitude |
2.75 |
| length_infant_1 |
MIssing: Not provided |
| length_infant_2 |
MIssing: Not provided |
| lims |
BFD102 |
| live births |
MIssing: Not provided |
| living_children |
MIssing: Not provided |
| longitude |
32.75 |
| malaria |
2 |
| molar_preg |
MIssing: Not provided |
| muac_infant_1 |
MIssing: Not provided |
| muac_infant_2 |
MIssing: Not provided |
| muac_mm |
305 |
| nausea |
MIssing: Not provided |
| norm_fetal_mov |
1 |
| nourishment_status_group |
obese |
| nugent score |
8 |
| ob_complications |
MIssing: Not provided |
| other_ob_history |
MIssing: Not provided |
| perc_dev |
MIssing: Not provided |
| physical samp avail now |
true |
| physical_location |
UWO |
| physical_specimen_location |
UWO |
| physical_specimen_remaining |
false |
| place_delivery |
MIssing: Not provided |
| prev_pregnancies |
MIssing: Not provided |
| public |
false |
| pulse |
70 |
| required_sample_info_status |
completed |
| resp_rate |
20 |
| sample name |
qiita_sid_2024:2024.visit3.MNIH61O.BFD102.V |
| sample type |
vaginal |
| sex |
female |
| spon_abortions |
MIssing: Not provided |
| still_births |
MIssing: Not provided |
| stool_parasite |
1 |
| syph |
MIssing: Not provided |
| time_delivery |
MIssing: Not provided |
| tot_mass |
77.5 |
| urine_bilirubin |
0 |
| urine_blood |
0 |
| urine_haemolysis |
Missing: Not reported |
| urine_ketone |
0 |
| urine_leukocyte |
75 |
| urine_nitrite |
0 |
| urine_ph |
6 |
| urine_protein |
0 |
| urine_spec_grav |
1.03 |
| urine_sugar |
0 |
| urine_urobilinogen |
0 |
| vag_delivery |
MIssing: Not provided |
| vaginal_csection |
MIssing: Not provided |
| vaginal_ph |
6 |
| well location |
E5 |
| well_plate |
H |