| ENA first public |
2016-08-17 |
| ENA last update |
2016-08-16 |
| External Id |
SAMEA4380421 |
| INSDC center alias |
UCSDMI |
| INSDC center name |
University of California San Diego Microbiome Initiative |
| INSDC first public |
2016-08-17T17:01:11Z |
| INSDC last update |
2016-08-16T03:26:16Z |
| INSDC status |
public |
| Submitter Id |
qiita_sid_1098:1098.egg.CO.2009.566 |
| altitude |
0 |
| anonymized name |
egg.CO.2009.566 |
| assigned_from_geo |
true |
| biological_specimen |
Tachycineta bicolor |
| body habitat |
UBERON:egg |
| body product |
UBERON:fertilized egg |
| body site |
UBERON:egg shell |
| collection_timestamp |
06/28/2009 |
| cornell_id |
566 |
| depth |
0 |
| dna_extracted |
true |
| egg_id |
G 1 |
| elevation |
1624.1 |
| emp_id |
egg.CO.2009.566 |
| env biome |
temperate forest biome |
| env feature |
nest of egg |
| env matter |
egg |
| env package |
host-associated |
| env_material |
egg |
| geo loc name |
USA |
| has_physical_specimen |
true |
| host common name |
tree swallow |
| host scientific name |
Tachycineta bicolor |
| host subject id |
egg.CO.2009.566 |
| host taxid |
72873 |
| latitude |
39.901435 |
| longitude |
-105.530505 |
| misc_param |
Every sample represents 10 seconds of swabbing. In the case of nest samples, collectors were instructed to swab all areas of the nest cup (not the wooden nestbox that the nest cup is resting in). And for egg samples, all eggs present were swabbed for a total of 10 seconds regardless of how many eggs were present. |
| nest id |
AR 712 |
| physical_specimen_location |
Cornell |
| physical_specimen_remaining |
false |
| public |
true |
| required_sample_info_status |
completed |
| sample name |
qiita_sid_1098:1098.egg.CO.2009.566 |
| sample type |
egg |
| sample_code_1 |
1 |
| sample_code_2 |
1 |
| site |
Boulder Co. |
| site id |
CO |
| sort |
159 |
| sort_anna |
2 |
| sort_juanma |
159 |
| state |
CO |
| state_year |
CO_2009 |
| time collected |
Missing: Not provided |
| year |
2009 |