| attributes |
| ENA first public |
2013-07-09 |
| ENA last update |
2018-03-09 |
| ENA-KEYWORD |
GSC, MIxS, MIMS (intended) |
| External Id |
SAMEA2128203 |
| IHMC medication code |
NO |
| INSDC center alias |
CSISP |
| INSDC center name |
Center for Public Health Research, University of Valencia |
| INSDC first public |
2013-07-09T17:00:39Z |
| INSDC last update |
2018-03-09T09:59:26Z |
| INSDC status |
public |
| Submitter Id |
Pool1 |
| age |
24 |
| amount or size of sample collected |
1g |
| body mass index |
19.7 |
| body product |
stool |
| broker name |
EBI-Metagenomics |
| collection date |
2011-06-15 |
| diet |
mediterranean |
| enviornmental package |
human-gut |
| environment (biome) |
ENVO:00000446 terrestrial biome |
| environment (featurel) |
ENVO:00009003 human-associated habitat |
| environment (material) |
ENVO:00002003 feces |
| height |
167 cm |
| host body temperature |
36.7ºC |
| host common name |
human |
| host subject id |
#1 |
| host taxid |
9606 |
| investigation type |
MIxS |
| library construction method |
Ligation of enzymatically digested DNA to pBluescript plasmid |
| library reads sequenced |
358 |
| library size |
358 |
| library vector |
pBluescript plasmid |
| life stage |
adult |
| nucleic acid extraction |
Ausubel, F. M., Brent, R., Kinston, R., et al. 1992, Current protocol in molecular biology. |
| project name |
Long insert human faecal metagenomic library. |
| sample collection device or method |
collection tube for faecal samples |
| sample name |
Pool1 |
| sample storage duration |
1 week |
| sample storage location |
freezer |
| sample storage temperature |
-80ºC |
| sequencing method |
Pyrosequencing |
| sex |
female |
| smoker |
Non-smoker |
|