home > sra-sample > ERS2203028
identifier ERS2203028
type sra-sample
sameAs
biosample  SAMEA104591746
organism human gut metagenome
attributes
ENA first public  2018-02-15
ENA last update  2018-02-14
External Id  SAMEA104591746
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-15T17:08:31Z
INSDC last update  2018-02-14T18:26:52Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000015943
acid_reflux  Unspecified
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age cat  70+
age years  70
age_corrected  70
alcohol consumption  false
alcohol_frequency  Never
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spiritshard_alcohol  false
alcohol_types_unspecified  true
alcohol_types_white_wine  false
allergic to i have no food allergies that i know of  false
allergic_to  Unspecified
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  true
alzheimers  I do not have this condition
anonymized name  000015943
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  true
artificial_sweeteners  Unspecified
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1942
bmi  21.61
bmi_cat  Normal
bmi_corrected  21.61
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  false
cancer  Unspecified
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  true
cdiff  I do not have this condition
census_region  West
chickenpox  Yes
clinical condition  I do not have this condition
collection date  06/05/2013
collection month  June
collection season  Summer
collection time  16:35
collection_timestamp  2013-06-05 16:35
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Occasionally (1-2 times/week)
country  USA
country of birth  United States
country_residence  Unspecified
csection  false
deodorant_use  I use an antiperspirant
depression_bipolar_schizophrenia  I do not have this condition
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  true
dog  false
dominant hand  I am right handed
drinking_water_source  Well
drinks_per_session  Unspecified
economic_region  Far West
elevation  145.9
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Daily
exercise_location  Outdoors
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Never
flossing_frequency  Daily
flu_vaccine_date  Year
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  USA:CA
gluten  I do not eat gluten because it makes me feel bad
height cm  168
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host common name  human
host subject id  932223e0e58603720a31e5074b49b6984438e9967a49116c560e694ca07221ea129f6b33617901aa24404f5b39e9ddbbfd28c060bf716ecfa5c0c169abf19fa2
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  Unspecified
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  I have not been outside of my country of residence in the past year.
latitude  39.9
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  Yes
longitude  -121.9
lowgrain_diet_type  No
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  Unspecified
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  Unspecified
mental_illness_type_bipolar_disorder  Unspecified
mental_illness_type_bulimia_nervosa  Unspecified
mental_illness_type_depression  Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder  Unspecified
mental_illness_type_schizophrenia  Unspecified
mental_illness_type_substance_abuse  Unspecified
mental_illness_type_unspecified  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Daily
milk_substitute_frequency  Never
multivitamin  No
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  Yes
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Daily
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  Yes
pets_other  Unspecified
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Never
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Rarely (a few times/month)
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Rarely (less than once/week)
roommates_in_study  No
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000015943
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  6-7 hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
specialized_diet_exclude_dairy  Unspecified
specialized_diet_exclude_nightshades  Unspecified
specialized_diet_exclude_refined_sugars  Unspecified
specialized_diet_fodmap  Unspecified
specialized_diet_halaal  Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet  Unspecified
specialized_diet_kosher  Unspecified
specialized_diet_modified_paleo_diet  Unspecified
specialized_diet_other_restrictions_not_described_here  Unspecified
specialized_diet_paleodiet_or_primal_diet  Unspecified
specialized_diet_raw_food_diet  Unspecified
specialized_diet_unspecified  Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Unspecified
state  CA
subset_age  false
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Rarely (less than once/week)
sugary_sweets_frequency  Regularly (3-5 times/week)
survey_id  a2bad301cc850bf5
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  21 to 30
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Daily
vivid_dreams  Unspecified
weight kg  61
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Daily
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2303802
sra-submission  ERA1210070
biosample  SAMEA104591746
sra-study  ERP012803
sra-experiment  ERX2355130
distribution JSONJSON-LD
Download
ERA1210070.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-16T19:41:46Z
dateModified 2021-09-03T10:32:00Z
datePublished 2018-02-20T22:44:18Z