home > sra-sample > ERS2203043
identifier ERS2203043
type sra-sample
sameAs
biosample  SAMEA104591761
organism human gut metagenome
attributes
ENA first public  2018-02-15
ENA last update  2018-02-14
External Id  SAMEA104591761
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-15T17:08:31Z
INSDC last update  2018-02-14T18:26:56Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000023601
acid_reflux  Diagnosed by a medical professional (doctor, physician assistant)
acne medication  false
acne_medication_otc  false
add_adhd  I do not have this condition
age cat  70+
age years  70
age_corrected  70
alcohol consumption  true
alcohol_frequency  Occasionally (1-2 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  Yes
alcohol_types_red_wine  true
alcohol_types_sour_beers  false
alcohol_types_spiritshard_alcohol  false
alcohol_types_unspecified  false
alcohol_types_white_wine  true
allergic to i have no food allergies that i know of  true
allergic_to  Unspecified
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  false
alzheimers  I do not have this condition
anonymized name  000023601
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  false
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1947
bmi  26.06
bmi_cat  Overweight
bmi_corrected  26.06
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  false
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  false
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical condition  Diagnosed by a medical professional (doctor, physician assistant)
collection date  2017-02-26
collection month  February
collection season  Winter
collection time  11:10
collection_timestamp  2017-02-26 11:10
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Never
country  Australia
country of birth  Australia
country_residence  Australia
csection  false
deodorant_use  I use deodorant
depression_bipolar_schizophrenia  Unspecified
diabetes  Diagnosed by a medical professional (doctor, physician assistant)
diabetes type  Type II diabetes
diet type  Omnivore
dna_extracted  true
dog  false
dominant hand  I am right handed
drinking_water_source  Filtered
drinks_per_session  1-2
economic_region  Unspecified
elevation  Unspecified
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Rarely (a few times/month)
exercise_location  Both
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Never
flossing_frequency  Regularly (3-5 times/week)
flu_vaccine_date  Year
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Regularly (3-5 times/week)
fungal_overgrowth  I do not have this condition
geo loc name  Australia:Unspecified
gluten  No
height cm  173
height_units  centimeters
high_fat_red_meat_frequency  Daily
homecooked_meals_frequency  Regularly (3-5 times/week)
host common name  human
host subject id  dda11f9777fbba874b06c31fccb426779c923925a9c582f6a8c054af58a2392e9ef828d9dad4cea72ac3f0552f3aaab70aed2395f840a7cdea4560abfabad915
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  I have not been outside of my country of residence in the past year.
latitude  Unspecified
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  Yes
longitude  Unspecified
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Daily
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Daily
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  No
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  Yes
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Never
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Daily
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Regularly (3-5 times/week)
roommates_in_study  Yes
salted_snacks_frequency  Never
sample name  qiita_sid_10317:10317.000023601
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  No
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  5-6 hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  Yes
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  Yes
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Yes
state  Unspecified
subset_age  false
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  false
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Never
survey_id  fe0ee11bef0ba659
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Yes
types_of_plants  6 to 10
vegetable_frequency  Rarely (less than once/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Daily
vivid_dreams  Rarely (a few times/month)
weight kg  78
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Daily
whole_grain_frequency  Never
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2303817ERR4020376
sra-submission  ERA1210070ERA2421996
biosample  SAMEA104591761
sra-study  ERP012803
sra-experiment  ERX2355145ERX4021764
distribution JSONJSON-LD
Download
ERA2421996.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-16T19:41:55Z
dateModified 2021-09-03T10:32:12Z
datePublished 2018-02-20T22:45:25Z