home > sra-sample > ERS2214416
identifier ERS2214416
type sra-sample
sameAs
biosample  SAMEA104603134
organism human gut metagenome
attributes
ENA first public  2018-02-22
ENA last update  2018-02-20
External Id  SAMEA104603134
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-22T17:05:07Z
INSDC last update  2018-02-20T17:48:55Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000071987
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  Unspecified
age cat  40s
age years  44
age_corrected  44
alcohol consumption  Yes
alcohol_frequency  Regularly (3-5 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  Yes
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  000071987
antibiotic_history  6 months
appendix_removed  No
artificial_sweeteners  Rarely (a few times/month)
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1973
bmi  20.31
bmi_cat  Normal
bmi_corrected  20.31
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  Unspecified
chickenpox  Yes
clinical condition  I do not have this condition
collection date  06/07/2017
collection month  June
collection season  Summer
collection time  09:15
collection_timestamp  06/07/2017 09:15
consume_animal_products_abx  Unspecified
contraceptive  No
cosmetics_frequency  Occasionally (1-2 times/week)
country  Japan
country of birth  Japan
country_residence  Japan
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  Filtered
drinks_per_session  4+
economic_region  Unspecified
elevation  27.3
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Both
fed_as_infant  Primarily breast milk
fermented_plant_frequency  Regularly (3-5 times/week)
flossing_frequency  Regularly (3-5 times/week)
flu_vaccine_date  Year
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Occasionally (1-2 times/week)
fungal_overgrowth  I do not have this condition
geo loc name  Japan:Tokyo
gluten  No
height cm  160
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
host common name  human
host subject id  738f434ff5a925568d1b0bed6e50e96cb986996b629fea0b0cd475e992c303b8d566076d8e7aed6653d6411db216d114a1d5eeb09bc94e6df74b886c0498b6cc
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  Month
latitude  35.6
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  Unspecified
longitude  139.7
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Daily
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Occasionally (1-2 times/week)
multivitamin  Unspecified
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  Yes
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  Unspecified
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Occasionally (1-2 times/week)
public  Yes
race  Asian or Pacific Islander
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Regularly (3-5 times/week)
roommates_in_study  Unspecified
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000071987
sample type  Stool
seafood_frequency  Regularly (3-5 times/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  6-7 hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  Yes
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  Tokyo
subset_age  true
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Occasionally (1-2 times/week)
sugary_sweets_frequency  Rarely (less than once/week)
survey_id  c6f6265bd5df6620
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  11 to 20
vegetable_frequency  Regularly (3-5 times/week)
vioscreen_a_bev  Unspecified
vioscreen_a_cal  Unspecified
vioscreen_acesupot  Unspecified
vioscreen_activity_level  Unspecified
vioscreen_add_sug  Unspecified
vioscreen_addsugar  Unspecified
vioscreen_adsugtot  Unspecified
vioscreen_age  Unspecified
vioscreen_alanine  Unspecified
vioscreen_alcohol  Unspecified
vioscreen_alcohol_servings  Unspecified
vioscreen_alphacar  Unspecified
vioscreen_alphtoce  Unspecified
vioscreen_alphtoco  Unspecified
vioscreen_arginine  Unspecified
vioscreen_ash  Unspecified
vioscreen_aspartam  Unspecified
vioscreen_aspartic  Unspecified
vioscreen_avcarb  Unspecified
vioscreen_bcodeid  Unspecified
vioscreen_betacar  Unspecified
vioscreen_betacryp  Unspecified
vioscreen_betaine  Unspecified
vioscreen_betatoco  Unspecified
vioscreen_biochana  Unspecified
vioscreen_bmi  Unspecified
vioscreen_caffeine  Unspecified
vioscreen_calcium  Unspecified
vioscreen_calcium_avg  Unspecified
vioscreen_calcium_dose  Unspecified
vioscreen_calcium_freq  Unspecified
vioscreen_calcium_from_dairy_servings  Unspecified
vioscreen_calcium_servings  Unspecified
vioscreen_calories  Unspecified
vioscreen_carbo  Unspecified
vioscreen_cholest  Unspecified
vioscreen_choline  Unspecified
vioscreen_clac9t11  Unspecified
vioscreen_clat10c12  Unspecified
vioscreen_copper  Unspecified
vioscreen_coumest  Unspecified
vioscreen_cystine  Unspecified
vioscreen_d_cheese  Unspecified
vioscreen_d_milk  Unspecified
vioscreen_d_tot_soym  Unspecified
vioscreen_d_total  Unspecified
vioscreen_d_yogurt  Unspecified
vioscreen_daidzein  Unspecified
vioscreen_database  Unspecified
vioscreen_delttoco  Unspecified
vioscreen_discfat_oil  Unspecified
vioscreen_discfat_sol  Unspecified
vioscreen_dob  Unspecified
vioscreen_eer  Unspecified
vioscreen_email  Unspecified
vioscreen_erythr  Unspecified
vioscreen_f_citmlb  Unspecified
vioscreen_f_nj_citmlb  Unspecified
vioscreen_f_nj_other  Unspecified
vioscreen_f_nj_total  Unspecified
vioscreen_f_other  Unspecified
vioscreen_f_total  Unspecified
vioscreen_fat  Unspecified
vioscreen_fiber  Unspecified
vioscreen_fibh2o  Unspecified
vioscreen_fibinso  Unspecified
vioscreen_finished  Unspecified
vioscreen_fish_servings  Unspecified
vioscreen_fol_deqv  Unspecified
vioscreen_fol_nat  Unspecified
vioscreen_fol_syn  Unspecified
vioscreen_formontn  Unspecified
vioscreen_fried_fish_servings  Unspecified
vioscreen_fried_food_servings  Unspecified
vioscreen_frt5_day  Unspecified
vioscreen_frtsumm  Unspecified
vioscreen_fructose  Unspecified
vioscreen_fruit_servings  Unspecified
vioscreen_g_nwhl  Unspecified
vioscreen_g_total  Unspecified
vioscreen_g_whl  Unspecified
vioscreen_galactos  Unspecified
vioscreen_gammtoco  Unspecified
vioscreen_gender  Unspecified
vioscreen_genistn  Unspecified
vioscreen_glac  Unspecified
vioscreen_gltc  Unspecified
vioscreen_glucose  Unspecified
vioscreen_glutamic  Unspecified
vioscreen_glycine  Unspecified
vioscreen_glycitn  Unspecified
vioscreen_grams  Unspecified
vioscreen_hei2010_dairy  Unspecified
vioscreen_hei2010_empty_calories  Unspecified
vioscreen_hei2010_fatty_acids  Unspecified
vioscreen_hei2010_fruit  Unspecified
vioscreen_hei2010_greens_beans  Unspecified
vioscreen_hei2010_protien_foods  Unspecified
vioscreen_hei2010_refined_grains  Unspecified
vioscreen_hei2010_score  Unspecified
vioscreen_hei2010_sea_foods_plant_protiens  Unspecified
vioscreen_hei2010_sodium  Unspecified
vioscreen_hei2010_veg  Unspecified
vioscreen_hei2010_whole_fruit  Unspecified
vioscreen_hei2010_whole_grains  Unspecified
vioscreen_hei_drk_g_org_veg_leg  Unspecified
vioscreen_hei_fruit  Unspecified
vioscreen_hei_grains  Unspecified
vioscreen_hei_meat_beans  Unspecified
vioscreen_hei_milk  Unspecified
vioscreen_hei_non_juice_frt  Unspecified
vioscreen_hei_oils  Unspecified
vioscreen_hei_sat_fat  Unspecified
vioscreen_hei_score  Unspecified
vioscreen_hei_sodium  Unspecified
vioscreen_hei_sol_fat_alc_add_sug  Unspecified
vioscreen_hei_veg  Unspecified
vioscreen_hei_whl_grains  Unspecified
vioscreen_height  Unspecified
vioscreen_histidin  Unspecified
vioscreen_inositol  Unspecified
vioscreen_iron  Unspecified
vioscreen_isoleuc  Unspecified
vioscreen_isomalt  Unspecified
vioscreen_joules  Unspecified
vioscreen_juice_servings  Unspecified
vioscreen_lactitol  Unspecified
vioscreen_lactose  Unspecified
vioscreen_legumes  Unspecified
vioscreen_leucine  Unspecified
vioscreen_line_gi  Unspecified
vioscreen_low_fat_dairy_serving  Unspecified
vioscreen_lutzeax  Unspecified
vioscreen_lycopene  Unspecified
vioscreen_lysine  Unspecified
vioscreen_m_egg  Unspecified
vioscreen_m_fish_hi  Unspecified
vioscreen_m_fish_lo  Unspecified
vioscreen_m_frank  Unspecified
vioscreen_m_meat  Unspecified
vioscreen_m_mpf  Unspecified
vioscreen_m_nutsd  Unspecified
vioscreen_m_organ  Unspecified
vioscreen_m_poult  Unspecified
vioscreen_m_soy  Unspecified
vioscreen_magnes  Unspecified
vioscreen_maltitol  Unspecified
vioscreen_maltose  Unspecified
vioscreen_mangan  Unspecified
vioscreen_mannitol  Unspecified
vioscreen_methhis3  Unspecified
vioscreen_methion  Unspecified
vioscreen_mfa141  Unspecified
vioscreen_mfa161  Unspecified
vioscreen_mfa181  Unspecified
vioscreen_mfa201  Unspecified
vioscreen_mfa221  Unspecified
vioscreen_mfatot  Unspecified
vioscreen_multi_calcium_avg  Unspecified
vioscreen_multi_calcium_dose  Unspecified
vioscreen_multivitamin  Unspecified
vioscreen_multivitamin_freq  Unspecified
vioscreen_natoco  Unspecified
vioscreen_nccglbr  Unspecified
vioscreen_nccglgr  Unspecified
vioscreen_niacin  Unspecified
vioscreen_niacineq  Unspecified
vioscreen_nitrogen  Unspecified
vioscreen_non_fried_fish_servings  Unspecified
vioscreen_nutrient_recommendation  Unspecified
vioscreen_omega3  Unspecified
vioscreen_oxalic  Unspecified
vioscreen_oxalicm  Unspecified
vioscreen_pantothe  Unspecified
vioscreen_pectins  Unspecified
vioscreen_pfa182  Unspecified
vioscreen_pfa183  Unspecified
vioscreen_pfa184  Unspecified
vioscreen_pfa204  Unspecified
vioscreen_pfa205  Unspecified
vioscreen_pfa225  Unspecified
vioscreen_pfa226  Unspecified
vioscreen_pfatot  Unspecified
vioscreen_phenylal  Unspecified
vioscreen_phosphor  Unspecified
vioscreen_phytic  Unspecified
vioscreen_pinitol  Unspecified
vioscreen_potass  Unspecified
vioscreen_procdate  Unspecified
vioscreen_proline  Unspecified
vioscreen_protanim  Unspecified
vioscreen_protein  Unspecified
vioscreen_protocol  Unspecified
vioscreen_protveg  Unspecified
vioscreen_questionnaire  Unspecified
vioscreen_recno  Unspecified
vioscreen_retinol  Unspecified
vioscreen_rgrain  Unspecified
vioscreen_ribofla  Unspecified
vioscreen_sacchar  Unspecified
vioscreen_salad_vegetable_servings  Unspecified
vioscreen_satoco  Unspecified
vioscreen_scf  Unspecified
vioscreen_scfv  Unspecified
vioscreen_selenium  Unspecified
vioscreen_serine  Unspecified
vioscreen_sfa100  Unspecified
vioscreen_sfa120  Unspecified
vioscreen_sfa140  Unspecified
vioscreen_sfa160  Unspecified
vioscreen_sfa170  Unspecified
vioscreen_sfa180  Unspecified
vioscreen_sfa200  Unspecified
vioscreen_sfa220  Unspecified
vioscreen_sfa40  Unspecified
vioscreen_sfa60  Unspecified
vioscreen_sfa80  Unspecified
vioscreen_sfatot  Unspecified
vioscreen_sodium  Unspecified
vioscreen_sorbitol  Unspecified
vioscreen_srvid  Unspecified
vioscreen_starch  Unspecified
vioscreen_started  Unspecified
vioscreen_subject_id  Unspecified
vioscreen_sucpoly  Unspecified
vioscreen_sucrlose  Unspecified
vioscreen_sucrose  Unspecified
vioscreen_sweet_servings  Unspecified
vioscreen_tagatose  Unspecified
vioscreen_tfa161t  Unspecified
vioscreen_tfa181t  Unspecified
vioscreen_tfa182t  Unspecified
vioscreen_tgrain  Unspecified
vioscreen_thiamin  Unspecified
vioscreen_threonin  Unspecified
vioscreen_time  Unspecified
vioscreen_totaltfa  Unspecified
vioscreen_totcla  Unspecified
vioscreen_totfolat  Unspecified
vioscreen_totsugar  Unspecified
vioscreen_tryptoph  Unspecified
vioscreen_tyrosine  Unspecified
vioscreen_user_id  Unspecified
vioscreen_v_drkgr  Unspecified
vioscreen_v_orange  Unspecified
vioscreen_v_other  Unspecified
vioscreen_v_potato  Unspecified
vioscreen_v_starcy  Unspecified
vioscreen_v_tomato  Unspecified
vioscreen_v_total  Unspecified
vioscreen_valine  Unspecified
vioscreen_veg5_day  Unspecified
vioscreen_vegetable_servings  Unspecified
vioscreen_vegsumm  Unspecified
vioscreen_visit  Unspecified
vioscreen_vita_iu  Unspecified
vioscreen_vita_rae  Unspecified
vioscreen_vita_re  Unspecified
vioscreen_vitb12  Unspecified
vioscreen_vitb6  Unspecified
vioscreen_vitc  Unspecified
vioscreen_vitd  Unspecified
vioscreen_vitd2  Unspecified
vioscreen_vitd3  Unspecified
vioscreen_vitd_iu  Unspecified
vioscreen_vite_iu  Unspecified
vioscreen_vitk  Unspecified
vioscreen_water  Unspecified
vioscreen_weight  Unspecified
vioscreen_wgrain  Unspecified
vioscreen_whole_grain_servings  Unspecified
vioscreen_xylitol  Unspecified
vioscreen_zinc  Unspecified
vitamin_b_supplement_frequency  Occasionally (1-2 times/week)
vitamin_d_supplement_frequency  Occasionally (1-2 times/week)
vivid_dreams  Regularly (3-5 times/week)
weight kg  52
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2318210ERR4019367
sra-submission  ERA1217292ERA2421689
biosample  SAMEA104603134
sra-study  ERP012803
sra-experiment  ERX2369502ERX4020755
distribution JSONJSON-LD
Download
ERA2421689.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-27T12:22:41Z
dateModified 2021-09-03T11:57:47Z
datePublished 2018-02-27T13:31:24Z