home > sra-sample > ERS2214925
identifier ERS2214925
type sra-sample
sameAs
biosample  SAMEA104603643
organism human gut metagenome
attributes
ENA first public  2018-02-22
ENA last update  2018-02-20
External Id  SAMEA104603643
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-22T17:05:08Z
INSDC last update  2018-02-20T22:43:43Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000022205
acid_reflux  Not provided
acne medication  false
acne_medication_otc  false
add_adhd  Not provided
age cat  60s
age years  68
age_corrected  68
alcohol consumption  true
alcohol_frequency  Rarely (a few times/month)
alcohol_types_beercider  false
alcohol_types_red_wine  false
alcohol_types_sour_beers  false
alcohol_types_spiritshard_alcohol  false
alcohol_types_unspecified  false
alcohol_types_white_wine  true
allergic to i have no food allergies that i know of  false
allergic_to_other  false
allergic_to_peanuts  false
allergic_to_shellfish  false
allergic_to_tree_nuts  false
allergic_to_unspecified  true
alzheimers  Not provided
anonymized name  000022205
antibiotic_history  6 months
appendix_removed  Not provided
artificial_sweeteners  Not provided
asd  Not provided
autoimmune  Not provided
birth year  1948
bmi  30.19
bmi_cat  Obese
bmi_corrected  30.19
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Not provided
bowel_movement_quality  Not provided
breastmilk_formula_ensure  false
cancer  Diagnosed by a medical professional (doctor, physician assistant)
cancer treatment  Chemotherapy
cardiovascular_disease  Not provided
cat  false
cdiff  Not provided
census_region  Not provided
chickenpox  true
clinical condition  Not provided
collection date  02/09/2017
collection month  February
collection season  Winter
collection time  07:00
collection_timestamp  2017-02-09 07:00
consume_animal_products_abx  true
contraceptive  Not provided
cosmetics_frequency  Never
country  Australia
country of birth  Australia
country_residence  Australia
csection  Not provided
deodorant_use  Not provided
depression_bipolar_schizophrenia  Not provided
diabetes  Not provided
diabetes type  Not provided
diet type  Omnivore
dna_extracted  true
dog  false
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  1
economic_region  Not provided
elevation  140.5
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  Not provided
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Indoors
fed_as_infant  Not provided
fermented_plant_frequency  Not provided
flossing_frequency  Not provided
flu_vaccine_date  Not provided
frozen_dessert_frequency  Not provided
fruit_frequency  Not provided
fungal_overgrowth  Not provided
geo loc name  Australia:VIC
gluten  Not provided
has_physical_specimen  true
height cm  182
height_units  centimeters
high_fat_red_meat_frequency  Not provided
homecooked_meals_frequency  Daily
host common name  human
host subject id  82ad4583f06a7852d4a35951ce5d6e84d2d8a2a652d6c977172f2cf83fda4d360dc4c462e9680c299f92e65859e959f40eee82166a4812f84c236e32e363bd20
host taxid  9606
ibd  Not provided
ibd diagnosis  Not provided
ibd_diagnosis_refined  Not provided
ibs  Not provided
kidney_disease  Not provided
lactose  true
last_move  I have lived in my current state of residence for more than a year.
last_travel  I have not been outside of my country of residence in the past year.
latitude  -37.9
level_of_education  Bachelor's degree
liver_disease  Not provided
livingwith  true
longitude  145.2
lowgrain_diet_type  Not provided
lung disease  Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency  Daily
mental_illness  Not provided
mental_illness_type_anorexia_nervosa  false
mental_illness_type_bipolar_disorder  false
mental_illness_type_bulimia_nervosa  false
mental_illness_type_depression  false
mental_illness_type_ptsd_posttraumatic_stress_disorder  false
mental_illness_type_schizophrenia  false
mental_illness_type_substance_abuse  false
mental_illness_type_unspecified  true
migraine  Not provided
milk_cheese_frequency  Not provided
milk_substitute_frequency  Not provided
multivitamin  false
nail_biter  Not provided
non_food_allergies_beestings  false
non_food_allergies_drug_eg_penicillin  false
non_food_allergies_pet_dander  false
non_food_allergies_poison_ivyoak  false
non_food_allergies_sun  false
non_food_allergies_unspecified  true
olive_oil  Not provided
one_liter_of_water_a_day_frequency  Not provided
other_supplement_frequency  false
pets_other  false
physical_specimen_location  UCSDMI
physical_specimen_remaining  true
pku  Not provided
pool_frequency  Rarely (a few times/month)
poultry_frequency  Not provided
pregnant  false
prepared_meals_frequency  Occasionally (1-2 times/week)
probiotic_frequency  Never
public  true
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Not provided
roommates_in_study  true
salted_snacks_frequency  Not provided
sample name  qiita_sid_10317:10317.000022205
sample type  Stool
seafood_frequency  Not provided
seasonal_allergies  Not provided
sex  male
sibo  Not provided
skin_condition  Not provided
sleep_duration  Not provided
smoking_frequency  Never
softener  Not provided
specialized_diet_exclude_dairy  false
specialized_diet_exclude_nightshades  false
specialized_diet_exclude_refined_sugars  false
specialized_diet_fodmap  false
specialized_diet_halaal  false
specialized_diet_i_do_not_eat_a_specialized_diet  true
specialized_diet_kosher  false
specialized_diet_modified_paleo_diet  false
specialized_diet_other_restrictions_not_described_here  false
specialized_diet_paleodiet_or_primal_diet  false
specialized_diet_raw_food_diet  false
specialized_diet_unspecified  false
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  false
state  VIC
subset_age  true
subset_antibiotic_history  false
subset_bmi  false
subset_diabetes  false
subset_healthy  false
subset_ibd  false
sugar_sweetened_drink_frequency  Not provided
sugary_sweets_frequency  Not provided
survey_id  3aaadf9faad1a7ea
teethbrushing_frequency  Daily
thyroid  Not provided
tonsils_removed  Not provided
types_of_plants  Not provided
vegetable_frequency  Not provided
vioscreen_a_bev  Not provided
vioscreen_a_cal  Not provided
vioscreen_acesupot  Not provided
vioscreen_add_sug  Not provided
vioscreen_addsugar  Not provided
vioscreen_adsugtot  Not provided
vioscreen_alanine  Not provided
vioscreen_alcohol  Not provided
vioscreen_alcohol_servings  Not provided
vioscreen_alphacar  Not provided
vioscreen_alphtoce  Not provided
vioscreen_alphtoco  Not provided
vioscreen_arginine  Not provided
vioscreen_ash  Not provided
vioscreen_aspartam  Not provided
vioscreen_aspartic  Not provided
vioscreen_avcarb  Not provided
vioscreen_betacar  Not provided
vioscreen_betacryp  Not provided
vioscreen_betaine  Not provided
vioscreen_betatoco  Not provided
vioscreen_biochana  Not provided
vioscreen_caffeine  Not provided
vioscreen_calcium  Not provided
vioscreen_calcium_avg  Not provided
vioscreen_calcium_dose  Not provided
vioscreen_calcium_freq  Not provided
vioscreen_calcium_from_dairy_servings  Not provided
vioscreen_calcium_servings  Not provided
vioscreen_calories  Not provided
vioscreen_carbo  Not provided
vioscreen_cholest  Not provided
vioscreen_choline  Not provided
vioscreen_clac9t11  Not provided
vioscreen_clat10c12  Not provided
vioscreen_copper  Not provided
vioscreen_coumest  Not provided
vioscreen_cystine  Not provided
vioscreen_d_cheese  Not provided
vioscreen_d_milk  Not provided
vioscreen_d_tot_soym  Not provided
vioscreen_d_total  Not provided
vioscreen_d_yogurt  Not provided
vioscreen_daidzein  Not provided
vioscreen_database  Not provided
vioscreen_delttoco  Not provided
vioscreen_discfat_oil  Not provided
vioscreen_discfat_sol  Not provided
vioscreen_erythr  Not provided
vioscreen_f_citmlb  Not provided
vioscreen_f_nj_citmlb  Not provided
vioscreen_f_nj_other  Not provided
vioscreen_f_nj_total  Not provided
vioscreen_f_other  Not provided
vioscreen_f_total  Not provided
vioscreen_fat  Not provided
vioscreen_fiber  Not provided
vioscreen_fibh2o  Not provided
vioscreen_fibinso  Not provided
vioscreen_fish_servings  Not provided
vioscreen_fol_deqv  Not provided
vioscreen_fol_nat  Not provided
vioscreen_fol_syn  Not provided
vioscreen_formontn  Not provided
vioscreen_fried_fish_servings  Not provided
vioscreen_fried_food_servings  Not provided
vioscreen_frt5_day  Not provided
vioscreen_frtsumm  Not provided
vioscreen_fructose  Not provided
vioscreen_fruit_servings  Not provided
vioscreen_g_nwhl  Not provided
vioscreen_g_total  Not provided
vioscreen_g_whl  Not provided
vioscreen_galactos  Not provided
vioscreen_gammtoco  Not provided
vioscreen_genistn  Not provided
vioscreen_glac  Not provided
vioscreen_gltc  Not provided
vioscreen_glucose  Not provided
vioscreen_glutamic  Not provided
vioscreen_glycine  Not provided
vioscreen_glycitn  Not provided
vioscreen_grams  Not provided
vioscreen_hei2010_dairy  Not provided
vioscreen_hei2010_empty_calories  Not provided
vioscreen_hei2010_fatty_acids  Not provided
vioscreen_hei2010_fruit  Not provided
vioscreen_hei2010_greens_beans  Not provided
vioscreen_hei2010_protien_foods  Not provided
vioscreen_hei2010_refined_grains  Not provided
vioscreen_hei2010_score  Not provided
vioscreen_hei2010_sea_foods_plant_protiens  Not provided
vioscreen_hei2010_sodium  Not provided
vioscreen_hei2010_veg  Not provided
vioscreen_hei2010_whole_fruit  Not provided
vioscreen_hei2010_whole_grains  Not provided
vioscreen_hei_drk_g_org_veg_leg  Not provided
vioscreen_hei_fruit  Not provided
vioscreen_hei_grains  Not provided
vioscreen_hei_meat_beans  Not provided
vioscreen_hei_milk  Not provided
vioscreen_hei_non_juice_frt  Not provided
vioscreen_hei_oils  Not provided
vioscreen_hei_sat_fat  Not provided
vioscreen_hei_score  Not provided
vioscreen_hei_sodium  Not provided
vioscreen_hei_sol_fat_alc_add_sug  Not provided
vioscreen_hei_veg  Not provided
vioscreen_hei_whl_grains  Not provided
vioscreen_histidin  Not provided
vioscreen_inositol  Not provided
vioscreen_iron  Not provided
vioscreen_isoleuc  Not provided
vioscreen_isomalt  Not provided
vioscreen_joules  Not provided
vioscreen_juice_servings  Not provided
vioscreen_lactitol  Not provided
vioscreen_lactose  Not provided
vioscreen_legumes  Not provided
vioscreen_leucine  Not provided
vioscreen_line_gi  Not provided
vioscreen_low_fat_dairy_serving  Not provided
vioscreen_lutzeax  Not provided
vioscreen_lycopene  Not provided
vioscreen_lysine  Not provided
vioscreen_m_egg  Not provided
vioscreen_m_fish_hi  Not provided
vioscreen_m_fish_lo  Not provided
vioscreen_m_frank  Not provided
vioscreen_m_meat  Not provided
vioscreen_m_mpf  Not provided
vioscreen_m_nutsd  Not provided
vioscreen_m_organ  Not provided
vioscreen_m_poult  Not provided
vioscreen_m_soy  Not provided
vioscreen_magnes  Not provided
vioscreen_maltitol  Not provided
vioscreen_maltose  Not provided
vioscreen_mangan  Not provided
vioscreen_mannitol  Not provided
vioscreen_methhis3  Not provided
vioscreen_methion  Not provided
vioscreen_mfa141  Not provided
vioscreen_mfa161  Not provided
vioscreen_mfa181  Not provided
vioscreen_mfa201  Not provided
vioscreen_mfa221  Not provided
vioscreen_mfatot  Not provided
vioscreen_multi_calcium_avg  Not provided
vioscreen_multi_calcium_dose  Not provided
vioscreen_multivitamin  Not provided
vioscreen_multivitamin_freq  Not provided
vioscreen_natoco  Not provided
vioscreen_nccglbr  Not provided
vioscreen_nccglgr  Not provided
vioscreen_niacin  Not provided
vioscreen_niacineq  Not provided
vioscreen_nitrogen  Not provided
vioscreen_non_fried_fish_servings  Not provided
vioscreen_omega3  Not provided
vioscreen_oxalic  Not provided
vioscreen_oxalicm  Not provided
vioscreen_pantothe  Not provided
vioscreen_pectins  Not provided
vioscreen_pfa182  Not provided
vioscreen_pfa183  Not provided
vioscreen_pfa184  Not provided
vioscreen_pfa204  Not provided
vioscreen_pfa205  Not provided
vioscreen_pfa225  Not provided
vioscreen_pfa226  Not provided
vioscreen_pfatot  Not provided
vioscreen_phenylal  Not provided
vioscreen_phosphor  Not provided
vioscreen_phytic  Not provided
vioscreen_pinitol  Not provided
vioscreen_potass  Not provided
vioscreen_proline  Not provided
vioscreen_protanim  Not provided
vioscreen_protein  Not provided
vioscreen_protveg  Not provided
vioscreen_questionnaire  Not provided
vioscreen_retinol  Not provided
vioscreen_rgrain  Not provided
vioscreen_ribofla  Not provided
vioscreen_sacchar  Not provided
vioscreen_salad_vegetable_servings  Not provided
vioscreen_satoco  Not provided
vioscreen_selenium  Not provided
vioscreen_serine  Not provided
vioscreen_sfa100  Not provided
vioscreen_sfa120  Not provided
vioscreen_sfa140  Not provided
vioscreen_sfa160  Not provided
vioscreen_sfa170  Not provided
vioscreen_sfa180  Not provided
vioscreen_sfa200  Not provided
vioscreen_sfa220  Not provided
vioscreen_sfa40  Not provided
vioscreen_sfa60  Not provided
vioscreen_sfa80  Not provided
vioscreen_sfatot  Not provided
vioscreen_sodium  Not provided
vioscreen_sorbitol  Not provided
vioscreen_starch  Not provided
vioscreen_sucpoly  Not provided
vioscreen_sucrlose  Not provided
vioscreen_sucrose  Not provided
vioscreen_sweet_servings  Not provided
vioscreen_tagatose  Not provided
vioscreen_tfa161t  Not provided
vioscreen_tfa181t  Not provided
vioscreen_tfa182t  Not provided
vioscreen_tgrain  Not provided
vioscreen_thiamin  Not provided
vioscreen_threonin  Not provided
vioscreen_totaltfa  Not provided
vioscreen_totcla  Not provided
vioscreen_totfolat  Not provided
vioscreen_totsugar  Not provided
vioscreen_tryptoph  Not provided
vioscreen_tyrosine  Not provided
vioscreen_v_drkgr  Not provided
vioscreen_v_orange  Not provided
vioscreen_v_other  Not provided
vioscreen_v_potato  Not provided
vioscreen_v_starcy  Not provided
vioscreen_v_tomato  Not provided
vioscreen_v_total  Not provided
vioscreen_valine  Not provided
vioscreen_veg5_day  Not provided
vioscreen_vegetable_servings  Not provided
vioscreen_vegsumm  Not provided
vioscreen_vita_iu  Not provided
vioscreen_vita_rae  Not provided
vioscreen_vita_re  Not provided
vioscreen_vitb12  Not provided
vioscreen_vitb6  Not provided
vioscreen_vitc  Not provided
vioscreen_vitd  Not provided
vioscreen_vitd2  Not provided
vioscreen_vitd3  Not provided
vioscreen_vitd_iu  Not provided
vioscreen_vite_iu  Not provided
vioscreen_vitk  Not provided
vioscreen_water  Not provided
vioscreen_wgrain  Not provided
vioscreen_whole_grain_servings  Not provided
vioscreen_xylitol  Not provided
vioscreen_zinc  Not provided
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Occasionally (1-2 times/week)
vivid_dreams  Not provided
weight kg  100
weight_change  Decreased more than 10 pounds
weight_units  kilograms
whole_eggs  Not provided
whole_grain_frequency  Not provided
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2319234
sra-submission  ERA1217322
biosample  SAMEA104603643
sra-study  ERP012803
sra-experiment  ERX2370526
distribution JSONJSON-LD
Download
ERA1217322.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-27T12:26:33Z
dateModified 2021-09-03T12:03:33Z
datePublished 2018-02-27T13:34:19Z