home > sra-sample > ERS2215334
identifier ERS2215334
type sra-sample
sameAs
biosample  SAMEA104604052
organism human gut metagenome
attributes
ENA first public  2018-02-22
ENA last update  2018-02-21
External Id  SAMEA104604052
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-02-22T17:05:10Z
INSDC last update  2018-02-21T02:49:34Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000050361
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  Yes
add_adhd  I do not have this condition
age cat  20s
age years  29
age_corrected  29
alcohol consumption  Yes
alcohol_frequency  Occasionally (1-2 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  Yes
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  Yes
alcohol_types_spiritshard_alcohol  Yes
alcohol_types_unspecified  No
alcohol_types_white_wine  Yes
allergic to i have no food allergies that i know of  No
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  Yes
allergic_to_shellfish  No
allergic_to_tree_nuts  Yes
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  000050361
antibiotic_history  Year
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1986
bmi  34.7
bmi_cat  Obese
bmi_corrected  34.7
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  West
chickenpox  Yes
clinical condition  I do not have this condition
collection date  2016-09-20
collection month  September
collection season  Fall
collection time  14:10
collection_timestamp  09/20/2016 14:10
consume_animal_products_abx  No
contraceptive  Yes, I use a hormonal IUD (Mirena)
cosmetics_frequency  Occasionally (1-2 times/week)
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I use deodorant
depression_bipolar_schizophrenia  Unspecified
diabetes  Diagnosed by a medical professional (doctor, physician assistant)
diabetes type  Type II diabetes
diet type  Omnivore
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  Filtered
drinks_per_session  1-2
economic_region  Rocky Mountain
elevation  1625.1
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Depends on the season
fed_as_infant  Primarily infant formula
fermented_plant_frequency  Never
flossing_frequency  Occasionally (1-2 times/week)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  USA:CO
gluten  No
height cm  167
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host common name  human
host subject id  2bc6ffbacb57b8330e701d38f4a0244fe2d6059638099430b083a17f0cfc3075c515db01afaed2428801111791ddff41d4c32eb9b63a5cc378ab5afdff31dc66
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  Diagnosed by a medical professional (doctor, physician assistant)
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  39.7
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  No
longitude  -105
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  Yes
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  Yes
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  No
migraine  I do not have this condition
milk_cheese_frequency  Regularly (3-5 times/week)
milk_substitute_frequency  Rarely (less than once/week)
multivitamin  Yes
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  Yes
non_food_allergies_pet_dander  Yes
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Regularly (3-5 times/week)
public  Yes
race  Hispanic
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Rarely (less than once/week)
roommates_in_study  No
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000050361
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration  7-8 hours
smoking_frequency  Rarely (a few times/month)
softener  No
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  Yes
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  CO
subset_age  true
subset_antibiotic_history  false
subset_bmi  false
subset_diabetes  false
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Rarely (less than once/week)
survey_id  a4e0dea812f9e775
teethbrushing_frequency  Daily
thyroid  Diagnosed by a medical professional (doctor, physician assistant)
tonsils_removed  No
types_of_plants  6 to 10
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Daily
vitamin_d_supplement_frequency  Daily
vivid_dreams  Never
weight kg  97
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Rarely (less than once/week)
whole_grain_frequency  Daily
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2319683
sra-submission  ERA1217344
biosample  SAMEA104604052
sra-study  ERP012803
sra-experiment  ERX2370975
distribution JSONJSON-LD
Download
ERA1217344.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-02-27T12:33:58Z
dateModified 2021-09-03T12:17:58Z
datePublished 2018-02-27T13:15:16Z