home > sra-sample > ERS238584
identifier ERS238584
type sra-sample
sameAs
biosample  SAMEA1879443
organism metagenome
attributes
ENA first public  2013-04-25
ENA last update  2018-03-09
External Id  SAMEA1879443
INSDC center alias  JIC
INSDC center name  The John Innes Centre
INSDC first public  2013-04-25T17:02:36Z
INSDC last update  2018-03-09T10:13:32Z
INSDC status  public
Submitter Id  P63
collection date  2009-03
current land use  experimental farm plot
current vegetation  fallow field
depth  0.01
environment (biome)  farm
environment (feature)  soil
environment (material)  soil
geographic location (countryand/orsea,region)  United Kingdom
geographic location (elevation)  12
geographic location (latitude)  52°62'29”
geographic location (longitude)  1°21'81”
investigation type  metagenome
nucleic acid amplification  Whole transcriptome amplification (Rubicon geneomics)
nucleic acid extraction  Powersoil RNA isolation
other  149 mg/kg nitrate (NO3-) 171 mg/kg phosphate (PO43-) 184mg/kg potassium (K+) 60mg/kg magnesium (Mg2+)
ph  7.49
project name  Rhizosphere metatranscriptomics
sample name  P63
sample weight for DNA extraction  1
sequencing method  454 FLX titanium
soil environmental package  soil
storage conditions (fresh/frozen/other)  fresh
total organic carbon  0.23
properties 
{...}
dbXrefs
bioproject  PRJEB1820
sra-run  ERR263034
sra-submission  ERA207876
biosample  SAMEA1879443
sra-study  ERP002497
sra-experiment  ERX237552
distribution JSONJSON-LD
Download
ERA207876.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-04-26T00:21:59Z
dateModified 2021-09-04T17:23:25Z
datePublished 2013-05-06T10:50:35Z