home > sra-sample > ERS2483065
identifier ERS2483065
type sra-sample
sameAs
biosample  SAMEA4662442
organism human oral metagenome
attributes
ENA first public  2018-05-12
ENA last update  2018-05-12
External Id  SAMEA4662442
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-05-12T17:02:50Z
INSDC last update  2018-05-12T06:15:11Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000022500
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  70+
age years  72
age_corrected  72
alcohol consumption  Yes
alcohol_frequency  Daily
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  No
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  000022500
antibiotic_history  Unspecified
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1945
bmi  21.2
bmi_cat  Normal
bmi_corrected  21.2
body habitat  UBERON:oral cavity
body product  UBERON:saliva
body site  UBERON:tongue
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  South
chickenpox  Yes
clinical condition  I do not have this condition
collection date  2017-05-05
collection month  May
collection season  Spring
collection time  15:15
collection_timestamp  05/05/2017 15:15
consume_animal_products_abx  Yes
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  2-3
economic_region  Southeast
elevation  1.7
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-oral
env_material  saliva
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Outdoors
fed_as_infant  Not sure
fermented_plant_frequency  Daily
flossing_frequency  Daily
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Occasionally (1-2 times/week)
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  USA:FL
gluten  No
height cm  180
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host common name  human
host subject id  25e8479c6bd4a631d755b677b8cfa2a4c7b0a99a2573a5495a83967a8a32c43d260f054c5eedd6e8e78e54b74b5726d5bc3f3f850a1eb8d9c70bf58621c9e611
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  27.2
level_of_education  Graduate or Professional degree
liver_disease  I do not have this condition
livingwith  No
longitude  -80.2
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Occasionally (1-2 times/week)
milk_substitute_frequency  Never
multivitamin  Yes
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency  Regularly (3-5 times/week)
other_supplement_frequency  No
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Regularly (3-5 times/week)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Daily
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Never
red_meat_frequency  Occasionally (1-2 times/week)
roommates  One
roommates_in_study  No
salted_snacks_frequency  Rarely (less than once/week)
sample name  qiita_sid_10317:10317.000022500
sample type  Mouth
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  No
sex  male
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  Yes
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  No
state  FL
subset_age  false
subset_antibiotic_history  false
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Occasionally (1-2 times/week)
survey_id  441606d5aa142604
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  Yes
types_of_plants  11 to 20
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Daily
vitamin_d_supplement_frequency  Daily
vivid_dreams  Never
weight kg  68
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Never
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2579633
sra-submission  ERA1484939
biosample  SAMEA4662442
sra-study  ERP012803
sra-experiment  ERX2596624
distribution JSONJSON-LD
Download
ERA1484939.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-03T17:33:28Z
dateModified 2021-09-27T04:04:32Z
datePublished 2018-07-03T18:17:54Z