home > sra-sample > ERS2491165
identifier ERS2491165
type sra-sample
sameAs
biosample  SAMEA4670552
organism human gut metagenome
attributes
ENA first public  2018-05-19
ENA last update  2018-05-19
External Id  SAMEA4670552
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2018-05-19T17:02:54Z
INSDC last update  2018-05-19T16:46:47Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000047252
acid_reflux  I do not have this condition
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  30s
age years  38
age_corrected  38
alcohol consumption  No
alcohol_frequency  Never
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  No
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  No
alcohol_types_unspecified  Yes
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
anonymized name  47252
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Never
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1977
bmi  20.98
bmi_cat  Normal
bmi_corrected  20.98
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  Two
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  No
cancer  I do not have this condition
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  West
chickenpox  Yes
clinical condition  I do not have this condition
collection date  4/15/16
collection month  April
collection season  Spring
collection time  8:00
collection_timestamp  4/15/16 8:00
consume_animal_products_abx  No
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I use deodorant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dna_extracted  Yes
dog  Yes
dominant hand  I am right handed
drinking_water_source  Well
drinks_per_session  I don't drink
economic_region  Rocky Mountain
elevation  1861.8
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Daily
exercise_location  Both
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Daily
flossing_frequency  Rarely (a few times/month)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Rarely (less than once/week)
fruit_frequency  Daily
fungal_overgrowth  I do not have this condition
geo loc name  USA:CO
gluten  I do not eat gluten because it makes me feel bad
height cm  167
height_units  centimeters
high_fat_red_meat_frequency  Rarely (less than once/week)
homecooked_meals_frequency  Daily
host common name  human
host subject id  d92a46050590677443a0f5826096af9f74eae285a29e2331ab99fe57b5504103c779e48fd53d115b60b34c5d8ebd2590859e7d86e6aeaa81de1599cd8eb232fd
host taxid  9606
ibd  Self-diagnosed
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  Unspecified
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  Month
latitude  39.7
level_of_education  Bachelor's degree
liver_disease  I do not have this condition
livingwith  No
longitude  -105.2
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  Unspecified
mental_illness_type  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Occasionally (1-2 times/week)
milk_substitute_frequency  Daily
multivitamin  Yes
nail_biter  Yes
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  Yes
olive_oil  Rarely (less than once/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  Yes
pets_other  No
physical_specimen_location  UCSDMI
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Occasionally (1-2 times/week)
poultry_frequency  Occasionally (1-2 times/week)
pregnant  No
prepared_meals_frequency  Rarely (less than once/week)
probiotic_frequency  Daily
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Rarely (less than once/week)
roommates  Two
roommates_in_study  No
salted_snacks_frequency  Occasionally (1-2 times/week)
sample name  qiita_sid_10317:10317.000047252
sample type  Stool
seafood_frequency  Rarely (less than once/week)
seasonal_allergies  No
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  8 or more hours
smoking_frequency  Occasionally (1-2 times/week)
softener  No
specialized_diet  Unspecified
state  CO
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  false
subset_ibd  false
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Never
survey_id  0f3c2cc72c80eb8c
teethbrushing_frequency  Daily
thyroid  I do not have this condition
tonsils_removed  No
types_of_plants  More than 30
vegetable_frequency  Daily
vitamin_b_supplement_frequency  Regularly (3-5 times/week)
vitamin_d_supplement_frequency  Rarely (a few times/month)
vivid_dreams  Never
weight kg  58
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Regularly (3-5 times/week)
whole_grain_frequency  Rarely (less than once/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR2587823
sra-submission  ERA1489869
biosample  SAMEA4670552
sra-study  ERP012803
sra-experiment  ERX2604099
distribution JSONJSON-LD
Download
ERA1489869.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-03T20:05:10Z
dateModified 2021-09-27T05:08:41Z
datePublished 2018-07-04T00:46:44Z