attributes |
collection date |
2006-04-28 |
collection date* |
2006-04-28 |
environment (biome) |
Human gut |
environment (biome)* |
Human gut |
environment (feature) |
Colon |
environment (feature)* |
Colon |
environment (material) |
Faeces |
environment (material)* |
Faeces |
extraction_plate |
27-1881 |
gastrointestinal tract disorder |
none |
geographic location (country and/or sea) |
Sweden |
geographic location (latitude) |
59.31 |
geographic location (latitude)* |
59.31 |
geographic location (longitude) |
18.09 |
geographic location (longitude)* |
18.09 |
geographic location (region and locality) |
Stockholm |
host age |
50 |
host body product |
Faeces |
host body-mass index |
27.3 |
host disease status |
NA |
host sex |
male |
host subject id |
3921 |
human gut environmental package |
human-gut |
human gut environmental package* |
human-gut |
investigation type |
mimarks-survey |
library screening strategy |
PCR amplification |
pcr primers |
341f/CCTACGGGNGGCWGCAG, 805r/GACTACHVGGGTATCTAATCC |
project name |
PopCol |
sample storage duration |
12 |
sample storage location |
Swedish Center for Communicable Disease Control |
sample storage temperature |
-80 |
sequencing method |
Illumina |
sequencing_run |
180316 |
target gene |
16S rRNA gene |
target subfragment |
16S rRNA, V3-V4 |
ENA-FIRST-PUBLIC |
2019-09-24 |
ENA-LAST-UPDATE |
2021-08-27 |
|