home > sra-sample > ERS4423559
identifier ERS4423559
type sra-sample
sameAs
biosample  SAMEA6674021
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674021
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:07Z
INSDC last update  2020-04-13T18:30:04Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000021292
acid_reflux  Unspecified
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  60s
age years  64
age_corrected  64
alcohol consumption  Yes
alcohol_frequency  Rarely (a few times/month)
alcohol_types_beercider  No
alcohol_types_red_wine  Yes
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  Yes
alcohol_types_unspecified  No
alcohol_types_white_wine  Yes
allergic to i have no food allergies that i know of  No
allergic_to_other  Yes
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  No
artificial_sweeteners  Unspecified
asd  Diagnosed by a medical professional (doctor, physician assistant)
autoimmune  I do not have this condition
birth year  1950
bmi_cat  Obese
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to be constipated (have difficulty passing stool) - Type 1 and 2
breastmilk_formula_ensure  No
cancer  Unspecified
cancer treatment  Unspecified
cardiovascular_disease  I do not have this condition
cat  No
cdiff  I do not have this condition
census_region  South
chickenpox  Yes
clinical condition  Unspecified
collection month  April
collection season  Spring
collection time  16:45
collection_date_only  2015-04-07
consume_animal_products_abx  Not sure
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  Unspecified
csection  No
deodorant_use  I use an antiperspirant
depression_bipolar_schizophrenia  Diagnosed by a medical professional (doctor, physician assistant)
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Omnivore
dog  No
dominant hand  I am right handed
drinking_water_source  City
drinks_per_session  Unspecified
economic_region  Mideast
elevation  103.1
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Occasionally (1-2 times/week)
exercise_location  Both
fed_as_infant  Primarily infant formula
fermented_plant_frequency  Regularly (3-5 times/week)
flossing_frequency  Never
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Regularly (3-5 times/week)
fruit_frequency  Occasionally (1-2 times/week)
fungal_overgrowth  I do not have this condition
geo loc name  USA:MD
gluten  No
height cm  157
high_fat_red_meat_frequency  Occasionally (1-2 times/week)
homecooked_meals_frequency  Regularly (3-5 times/week)
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  I do not have this condition
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  1 year
latitude  39
level_of_education  Some graduate school or professional
liver_disease  I do not have this condition
livingwith  No
longitude  -77
lowgrain_diet_type  No
lung disease  I do not have this condition
meat_eggs_frequency  Regularly (3-5 times/week)
mental_illness  Unspecified
mental_illness_type_anorexia_nervosa  Unspecified
mental_illness_type_bipolar_disorder  Unspecified
mental_illness_type_bulimia_nervosa  Unspecified
mental_illness_type_depression  Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder  Unspecified
mental_illness_type_schizophrenia  Unspecified
mental_illness_type_substance_abuse  Unspecified
mental_illness_type_unspecified  Unspecified
migraine  I do not have this condition
milk_cheese_frequency  Daily
milk_substitute_frequency  Never
multivitamin  No
nail_biter  Yes
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  No
non_food_allergies_pet_dander  Yes
non_food_allergies_poison_ivyoak  Yes
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency  Daily
other_supplement_frequency  No
pets_other  Unspecified
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Regularly (3-5 times/week)
pregnant  No
prepared_meals_frequency  Daily
probiotic_frequency  Never
race  Caucasian
ready_to_eat_meals_frequency  Rarely (less than once/week)
red_meat_frequency  Occasionally (1-2 times/week)
roommates_in_study  No
salted_snacks_frequency  Daily
sample name  qiita_sid_10317:10317.000021292
sample type  Stool
seafood_frequency  Occasionally (1-2 times/week)
seasonal_allergies  Yes
sex  female
sibo  I do not have this condition
skin_condition  I do not have this condition
sleep_duration  6-7 hours
smoking_frequency  Never
softener  Yes
specialized_diet_exclude_dairy  Unspecified
specialized_diet_exclude_nightshades  Unspecified
specialized_diet_exclude_refined_sugars  Unspecified
specialized_diet_fodmap  Unspecified
specialized_diet_halaal  Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet  Unspecified
specialized_diet_kosher  Unspecified
specialized_diet_modified_paleo_diet  Unspecified
specialized_diet_other_restrictions_not_described_here  Unspecified
specialized_diet_paleodiet_or_primal_diet  Unspecified
specialized_diet_raw_food_diet  Unspecified
specialized_diet_unspecified  Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo  Unspecified
state  MD
subset_age  true
subset_antibiotic_history  true
subset_bmi  false
subset_diabetes  true
subset_healthy  false
subset_ibd  true
sugar_sweetened_drink_frequency  Never
sugary_sweets_frequency  Daily
teethbrushing_frequency  Daily
thyroid  Diagnosed by a medical professional (doctor, physician assistant)
tonsils_removed  No
types_of_plants  Unspecified
vegetable_frequency  Occasionally (1-2 times/week)
vitamin_b_supplement_frequency  Never
vitamin_d_supplement_frequency  Never
vivid_dreams  Unspecified
weight kg  80
weight_change  Remained stable
whole_eggs  Occasionally (1-2 times/week)
whole_grain_frequency  Occasionally (1-2 times/week)
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4018885
sra-submission  ERA2421685
biosample  SAMEA6674021
sra-study  ERP012803
sra-experiment  ERX4020273
distribution JSONJSON-LD
Download
ERA2421685.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:43:56Z
dateModified 2021-09-29T04:15:14Z
datePublished 2020-04-19T01:30:39Z