home > sra-sample > ERS4423825
identifier ERS4423825
type sra-sample
sameAs
biosample  SAMEA6674287
organism human gut metagenome
attributes
ENA first public  2020-04-14
ENA last update  2020-04-13
External Id  SAMEA6674287
INSDC center alias  UCSDMI
INSDC center name  University of California San Diego Microbiome Initiative
INSDC first public  2020-04-14T16:28:04Z
INSDC last update  2020-04-13T20:24:51Z
INSDC status  public
Submitter Id  qiita_sid_10317:10317.000043171
acid_reflux  Self-diagnosed
acne medication  No
acne_medication_otc  No
add_adhd  I do not have this condition
age cat  50s
age years  54
age_corrected  54
alcohol consumption  Yes
alcohol_frequency  Regularly (3-5 times/week)
alcohol_types  Unspecified
alcohol_types_beercider  No
alcohol_types_red_wine  No
alcohol_types_sour_beers  No
alcohol_types_spiritshard_alcohol  Yes
alcohol_types_unspecified  No
alcohol_types_white_wine  No
allergic to i have no food allergies that i know of  Yes
allergic_to  Unspecified
allergic_to_other  No
allergic_to_peanuts  No
allergic_to_shellfish  No
allergic_to_tree_nuts  No
allergic_to_unspecified  No
alzheimers  I do not have this condition
antibiotic_history  I have not taken antibiotics in the past year.
appendix_removed  Yes
artificial_sweeteners  Unspecified
asd  I do not have this condition
assigned_from_geo  Yes
autoimmune  I do not have this condition
birth year  1964
bmi_cat  Normal
body habitat  UBERON:feces
body product  UBERON:feces
body site  UBERON:feces
bowel_movement_frequency  One
bowel_movement_quality  I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure  Unspecified
cancer  Diagnosed by a medical professional (doctor, physician assistant)
cancer treatment  Surgery only
cardiovascular_disease  I do not have this condition
cat  Yes
cdiff  I do not have this condition
census_region  South
chickenpox  Yes
clinical condition  Self-diagnosed
collection month  December
collection season  Winter
consume_animal_products_abx  No
contraceptive  No
cosmetics_frequency  Never
country  USA
country of birth  United States
country_residence  United States
csection  No
deodorant_use  I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia  Unspecified
diabetes  I do not have this condition
diabetes type  Unspecified
diet type  Vegetarian but eat seafood
dna_extracted  Yes
dog  No
dominant hand  I am right handed
drinking_water_source  Bottled
drinks_per_session  1-2
economic_region  Southeast
elevation  2.6
env biome  dense settlement biome
env feature  human-associated habitat
env package  human-gut
env_material  feces
epilepsy_or_seizure_disorder  I do not have this condition
exercise_frequency  Regularly (3-5 times/week)
exercise_location  Both
fed_as_infant  A mixture of breast milk and formula
fermented_plant_frequency  Unspecified
flossing_frequency  Regularly (3-5 times/week)
flu_vaccine_date  I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency  Unspecified
fruit_frequency  Unspecified
fungal_overgrowth  I do not have this condition
geo loc name  USA:FL
gluten  Unspecified
height cm  182
height_units  centimeters
high_fat_red_meat_frequency  Unspecified
homecooked_meals_frequency  Unspecified
host common name  human
host taxid  9606
ibd  I do not have this condition
ibd diagnosis  Unspecified
ibd_diagnosis_refined  Unspecified
ibs  I do not have this condition
kidney_disease  Diagnosed by a medical professional (doctor, physician assistant)
lactose  No
last_move  I have lived in my current state of residence for more than a year.
last_travel  I have not been outside of my country of residence in the past year.
latitude  26.3
level_of_education  Some graduate school or professional
liver_disease  I do not have this condition
livingwith  No
longitude  -80.3
lowgrain_diet_type  Unspecified
lung disease  I do not have this condition
meat_eggs_frequency  Unspecified
mental_illness  No
mental_illness_type  Unspecified
mental_illness_type_anorexia_nervosa  No
mental_illness_type_bipolar_disorder  No
mental_illness_type_bulimia_nervosa  No
mental_illness_type_depression  No
mental_illness_type_ptsd_posttraumatic_stress_disorder  No
mental_illness_type_schizophrenia  No
mental_illness_type_substance_abuse  No
mental_illness_type_unspecified  Yes
migraine  I do not have this condition
milk_cheese_frequency  Unspecified
milk_substitute_frequency  Unspecified
multivitamin  Yes
nail_biter  No
non_food_allergies  Unspecified
non_food_allergies_beestings  No
non_food_allergies_drug_eg_penicillin  Yes
non_food_allergies_pet_dander  No
non_food_allergies_poison_ivyoak  No
non_food_allergies_sun  No
non_food_allergies_unspecified  No
olive_oil  Unspecified
one_liter_of_water_a_day_frequency  Unspecified
other_supplement_frequency  No
pets_other  No
physical_specimen_remaining  Yes
pku  I do not have this condition
pool_frequency  Rarely (a few times/month)
poultry_frequency  Unspecified
pregnant  No
prepared_meals_frequency  Unspecified
probiotic_frequency  Rarely (a few times/month)
public  Yes
race  Caucasian
ready_to_eat_meals_frequency  Unspecified
red_meat_frequency  Unspecified
roommates_in_study  No
salted_snacks_frequency  Unspecified
sample name  qiita_sid_10317:10317.000043171
sample type  Stool
seafood_frequency  Unspecified
seasonal_allergies  Yes
sex  male
sibo  I do not have this condition
skin_condition  Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration  7-8 hours
smoking_frequency  Never
softener  Yes
specialized_diet  Unspecified
specialized_diet_exclude_dairy  No
specialized_diet_exclude_nightshades  No
specialized_diet_exclude_refined_sugars  No
specialized_diet_fodmap  No
specialized_diet_halaal  No
specialized_diet_i_do_not_eat_a_specialized_diet  No
specialized_diet_kosher  No
specialized_diet_modified_paleo_diet  No
specialized_diet_other_restrictions_not_described_here  No
specialized_diet_paleodiet_or_primal_diet  No
specialized_diet_raw_food_diet  No
specialized_diet_unspecified  No
specialized_diet_westenprice_or_other_lowgrain_low_processed_food_diet  Yes
state  FL
subset_age  true
subset_antibiotic_history  true
subset_bmi  true
subset_diabetes  true
subset_healthy  true
subset_ibd  true
sugar_sweetened_drink_frequency  Unspecified
sugary_sweets_frequency  Unspecified
teethbrushing_frequency  Regularly (3-5 times/week)
thyroid  I do not have this condition
tonsils_removed  Yes
types_of_plants  Unspecified
vegetable_frequency  Unspecified
vitamin_b_supplement_frequency  Rarely (a few times/month)
vitamin_d_supplement_frequency  Never
vivid_dreams  Rarely (a few times/month)
weight kg  79
weight_change  Remained stable
weight_units  kilograms
whole_eggs  Unspecified
whole_grain_frequency  Unspecified
properties 
{...}
dbXrefs
bioproject  PRJEB11419
sra-run  ERR4019178
sra-submission  ERA2421688
biosample  SAMEA6674287
sra-study  ERP012803
sra-experiment  ERX4020566
distribution JSONJSON-LD
Download
ERA2421688.sample.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2020-04-18T18:47:47Z
dateModified 2021-09-29T04:19:12Z
datePublished 2020-04-19T01:07:41Z